Top 10 genes with highest correlation to Rv1749c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1526c/- | (cc=0.5462) | info on Rv1526c/- |
| Rv3213c/- | (cc=0.5165) | info on Rv3213c/- |
| Rv3429/PPE59 | (cc=0.5102) | info on Rv3429/PPE59 |
| Rv1583c/- | (cc=0.5057) | info on Rv1583c/- |
| Rv0028/- | (cc=0.5054) | info on Rv0028/- |
| Rv0042c/- | (cc=0.4944) | info on Rv0042c/- |
| Rv3217c/- | (cc=0.4881) | info on Rv3217c/- |
| Rv2237/- | (cc=0.4811) | info on Rv2237/- |
| Rv1981c/nrdF1 | (cc=0.4701) | info on Rv1981c/nrdF1 |
| Rv0432/sodC | (cc=0.47) | info on Rv0432/sodC |
Correlation of Rv1749c/- with Rv1583c/-
Normalized LFCs for Rv1749c/-:
(description and provenance of datasets)
| Rv1749c/- | Rv1583c/- | |
| Fe_supp_jason_reseq | 0.218 | 0.515 |
| low_pH_jason_reseq | 0.11 | 1.549 |
| NO_jason_reseq | 0.278 | 0.832 |
| B6_jason_reseq | -0.818 | -2.401 |
| MHCII_jason_reseq | -0.357 | -1.772 |
| Isoniazid02 | -0.445 | 0.789 |
| Rifampicin4 | -0.542 | 1.18 |
| Ethambutol3 | -0.158 | 0.676 |
| Meropenem3 | 0.097 | -0.246 |
| Vancomycin16 | -0.366 | 0.324 |
| Rv2680_day32 | -1.062 | -1.26 |
| H37Rv_KO_MarP | -0.278 | 0.107 |
| hypoxia_3wks | -0.666 | -0.977 |
| hypoxia_6wks | -0.714 | 0.672 |
| glycerol | -1.006 | 0.0 |
| cholesterol | -0.46 | -0.46 |
| AJ | -0.05 | -1.071 |
| Bibs02 | -0.378 | -0.991 |
| Bibs02c | -0.139 | 0.743 |
| BL6 | 1.067 | 3.191 |
| BL6a | 0.242 | 1.936 |
| BXD01 | 0.192 | 1.298 |
| BXD010 | 0.787 | 1.592 |
| BXD011 | 0.486 | 2.091 |
| BXD03 | -0.291 | 2.033 |
| BXD04 | -0.064 | 1.324 |
| BXD05 | 0.642 | 1.302 |
| BXD06 | 0.111 | 1.925 |
| BXD07 | 0.57 | 2.073 |
| BXD08 | 0.547 | 1.806 |
| BXD09 | 0.268 | 1.625 |
| CAST | -0.118 | 0.736 |
| CCcont | 0.844 | 2.504 |
| DS01 | 0.149 | 0.962 |
| DS02 | 0.334 | 0.054 |
| DS04 | 0.537 | 1.612 |
| DS0c | 0.223 | -1.798 |
| GP01 | 1.649 | 1.857 |
| GP02 | 0.6 | 1.808 |
| GP0c | 1.255 | 2.036 |
| NOD | 0.094 | 0.797 |
| NZO | -0.276 | 0.673 |
| PWK | -0.207 | -0.905 |
| H37Rv_KO_CtpC | -0.791 | 1.404 |
| H37Rv_KO_CtpD | 0.967 | 3.186 |
| H37Rv_KO_Rv1272 | -0.149 | 0.795 |
| H37Rv_KO_SugABC | 1.05 | 1.851 |
| H37Rv_KO_MbtN | -0.061 | 0.987 |
| Trans05 | 0.913 | 1.01 |
| macrophage_unactivated | -0.196 | 0.559 |
| IL1 | -0.43 | 0.0 |
| Rapamycin | -0.301 | 0.862 |
| Tcell | -0.029 | 0.469 |
| GMCSF | 0.327 | 0.805 |
| IFNab | 0.178 | -0.115 |
| IFNg | 0.024 | 1.219 |
| IFNg_GMCSF1 | 0.795 | 0.537 |
| Rv1432_day32 | 0.314 | 1.454 |
| Rv1565c_day32 | -2.443 | 0.526 |
| secA2_input | 0.36 | -0.227 |
| delta_Rv3594 | 0.45 | -1.637 |
| delta_Rv3717 | -0.011 | -0.945 |
| delta_Rv3811 | 0.109 | -0.448 |
| delta_Rv0954 | 0.205 | -0.472 |
| PonA1 | 0.749 | -0.396 |
| EccD1_KO | -0.118 | 2.088 |
| EspI_KO | -0.06 | 1.141 |
| PE35_KO | -0.528 | 1.523 |
| PPE68_KO | -0.378 | 1.638 |
| glycerol2 | 0.668 | 1.813 |
| lignocerate | 1.269 | 2.527 |
| oleate | -0.123 | -2.562 |
| phosphatidylcholine | 0.859 | 1.909 |
| acetate | 1.322 | 2.818 |
| glucAc | 1.325 | 2.145 |
| Rv0950ko | 0.289 | 0.826 |
| Rv1096ko | -0.642 | -1.197 |
| Rv3684ko | -1.002 | -1.251 |
| delta_otsA_trehalose | 0.706 | 0.204 |