Top 10 genes with highest correlation to Rv1749c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1526c/- | (cc=0.5462) | info on Rv1526c/- |
| Rv3213c/- | (cc=0.5165) | info on Rv3213c/- |
| Rv3429/PPE59 | (cc=0.5102) | info on Rv3429/PPE59 |
| Rv1583c/- | (cc=0.5057) | info on Rv1583c/- |
| Rv0028/- | (cc=0.5054) | info on Rv0028/- |
| Rv0042c/- | (cc=0.4944) | info on Rv0042c/- |
| Rv3217c/- | (cc=0.4881) | info on Rv3217c/- |
| Rv2237/- | (cc=0.4811) | info on Rv2237/- |
| Rv1981c/nrdF1 | (cc=0.4701) | info on Rv1981c/nrdF1 |
| Rv0432/sodC | (cc=0.47) | info on Rv0432/sodC |
Correlation of Rv1749c/- with Rv3217c/-
Normalized LFCs for Rv1749c/-:
(description and provenance of datasets)
| Rv1749c/- | Rv3217c/- | |
| Fe_supp_jason_reseq | 0.218 | 1.552 |
| low_pH_jason_reseq | 0.11 | 0.915 |
| NO_jason_reseq | 0.278 | -0.583 |
| B6_jason_reseq | -0.818 | 3.158 |
| MHCII_jason_reseq | -0.357 | -1.442 |
| Isoniazid02 | -0.445 | -0.419 |
| Rifampicin4 | -0.542 | 0.338 |
| Ethambutol3 | -0.158 | 0.015 |
| Meropenem3 | 0.097 | 0.393 |
| Vancomycin16 | -0.366 | 0.417 |
| Rv2680_day32 | -1.062 | -2.096 |
| H37Rv_KO_MarP | -0.278 | 0.151 |
| hypoxia_3wks | -0.666 | -2.333 |
| hypoxia_6wks | -0.714 | -0.451 |
| glycerol | -1.006 | -2.028 |
| cholesterol | -0.46 | -1.607 |
| AJ | -0.05 | -0.852 |
| Bibs02 | -0.378 | -3.04 |
| Bibs02c | -0.139 | -0.749 |
| BL6 | 1.067 | 1.636 |
| BL6a | 0.242 | 0.547 |
| BXD01 | 0.192 | -1.47 |
| BXD010 | 0.787 | 0.088 |
| BXD011 | 0.486 | 0.133 |
| BXD03 | -0.291 | 0.758 |
| BXD04 | -0.064 | -0.388 |
| BXD05 | 0.642 | -0.61 |
| BXD06 | 0.111 | -1.64 |
| BXD07 | 0.57 | -1.73 |
| BXD08 | 0.547 | -0.643 |
| BXD09 | 0.268 | -0.847 |
| CAST | -0.118 | 0.614 |
| CCcont | 0.844 | 0.457 |
| DS01 | 0.149 | -1.167 |
| DS02 | 0.334 | -1.237 |
| DS04 | 0.537 | -1.561 |
| DS0c | 0.223 | -0.607 |
| GP01 | 1.649 | 1.169 |
| GP02 | 0.6 | 0.881 |
| GP0c | 1.255 | 0.488 |
| NOD | 0.094 | -1.38 |
| NZO | -0.276 | -1.871 |
| PWK | -0.207 | -1.115 |
| H37Rv_KO_CtpC | -0.791 | 0.848 |
| H37Rv_KO_CtpD | 0.967 | 1.613 |
| H37Rv_KO_Rv1272 | -0.149 | 0.113 |
| H37Rv_KO_SugABC | 1.05 | 2.251 |
| H37Rv_KO_MbtN | -0.061 | 0.41 |
| Trans05 | 0.913 | 0.976 |
| macrophage_unactivated | -0.196 | -0.988 |
| IL1 | -0.43 | -0.833 |
| Rapamycin | -0.301 | -1.132 |
| Tcell | -0.029 | -0.811 |
| GMCSF | 0.327 | -1.663 |
| IFNab | 0.178 | 0.106 |
| IFNg | 0.024 | -0.583 |
| IFNg_GMCSF1 | 0.795 | -1.728 |
| Rv1432_day32 | 0.314 | -0.608 |
| Rv1565c_day32 | -2.443 | -1.275 |
| secA2_input | 0.36 | -0.332 |
| delta_Rv3594 | 0.45 | 1.253 |
| delta_Rv3717 | -0.011 | 0.978 |
| delta_Rv3811 | 0.109 | 1.254 |
| delta_Rv0954 | 0.205 | 1.215 |
| PonA1 | 0.749 | 1.588 |
| EccD1_KO | -0.118 | 1.408 |
| EspI_KO | -0.06 | 1.152 |
| PE35_KO | -0.528 | -0.23 |
| PPE68_KO | -0.378 | 0.061 |
| glycerol2 | 0.668 | 2.081 |
| lignocerate | 1.269 | 3.315 |
| oleate | -0.123 | 0.0 |
| phosphatidylcholine | 0.859 | 3.084 |
| acetate | 1.322 | 4.414 |
| glucAc | 1.325 | 4.344 |
| Rv0950ko | 0.289 | 0.211 |
| Rv1096ko | -0.642 | -0.808 |
| Rv3684ko | -1.002 | -0.626 |
| delta_otsA_trehalose | 0.706 | 0.39 |