Top 10 genes with highest correlation to Rv1749c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1526c/- | (cc=0.5462) | info on Rv1526c/- |
| Rv3213c/- | (cc=0.5165) | info on Rv3213c/- |
| Rv3429/PPE59 | (cc=0.5102) | info on Rv3429/PPE59 |
| Rv1583c/- | (cc=0.5057) | info on Rv1583c/- |
| Rv0028/- | (cc=0.5054) | info on Rv0028/- |
| Rv0042c/- | (cc=0.4944) | info on Rv0042c/- |
| Rv3217c/- | (cc=0.4881) | info on Rv3217c/- |
| Rv2237/- | (cc=0.4811) | info on Rv2237/- |
| Rv1981c/nrdF1 | (cc=0.4701) | info on Rv1981c/nrdF1 |
| Rv0432/sodC | (cc=0.47) | info on Rv0432/sodC |
Correlation of Rv1749c/- with Rv3213c/-
Normalized LFCs for Rv1749c/-:
(description and provenance of datasets)
| Rv1749c/- | Rv3213c/- | |
| Fe_supp_jason_reseq | 0.218 | -0.404 |
| low_pH_jason_reseq | 0.11 | -0.085 |
| NO_jason_reseq | 0.278 | -0.205 |
| B6_jason_reseq | -0.818 | -0.524 |
| MHCII_jason_reseq | -0.357 | -0.067 |
| Isoniazid02 | -0.445 | -0.263 |
| Rifampicin4 | -0.542 | 0.022 |
| Ethambutol3 | -0.158 | 0.051 |
| Meropenem3 | 0.097 | -0.062 |
| Vancomycin16 | -0.366 | 0.045 |
| Rv2680_day32 | -1.062 | 0.981 |
| H37Rv_KO_MarP | -0.278 | -0.047 |
| hypoxia_3wks | -0.666 | -1.069 |
| hypoxia_6wks | -0.714 | -1.416 |
| glycerol | -1.006 | -0.563 |
| cholesterol | -0.46 | -0.031 |
| AJ | -0.05 | -0.829 |
| Bibs02 | -0.378 | -0.808 |
| Bibs02c | -0.139 | -1.413 |
| BL6 | 1.067 | 1.303 |
| BL6a | 0.242 | -0.92 |
| BXD01 | 0.192 | -0.108 |
| BXD010 | 0.787 | 0.181 |
| BXD011 | 0.486 | -0.166 |
| BXD03 | -0.291 | 0.359 |
| BXD04 | -0.064 | 0.533 |
| BXD05 | 0.642 | 0.029 |
| BXD06 | 0.111 | -0.039 |
| BXD07 | 0.57 | 0.115 |
| BXD08 | 0.547 | -0.347 |
| BXD09 | 0.268 | 0.0 |
| CAST | -0.118 | -0.227 |
| CCcont | 0.844 | 0.355 |
| DS01 | 0.149 | -1.205 |
| DS02 | 0.334 | -0.373 |
| DS04 | 0.537 | -0.1 |
| DS0c | 0.223 | -0.047 |
| GP01 | 1.649 | 2.03 |
| GP02 | 0.6 | 1.043 |
| GP0c | 1.255 | -0.009 |
| NOD | 0.094 | -0.872 |
| NZO | -0.276 | 0.368 |
| PWK | -0.207 | -0.337 |
| H37Rv_KO_CtpC | -0.791 | 0.188 |
| H37Rv_KO_CtpD | 0.967 | 0.226 |
| H37Rv_KO_Rv1272 | -0.149 | -0.219 |
| H37Rv_KO_SugABC | 1.05 | -0.305 |
| H37Rv_KO_MbtN | -0.061 | -0.134 |
| Trans05 | 0.913 | 0.009 |
| macrophage_unactivated | -0.196 | 0.278 |
| IL1 | -0.43 | 0.228 |
| Rapamycin | -0.301 | 0.138 |
| Tcell | -0.029 | 0.218 |
| GMCSF | 0.327 | -0.248 |
| IFNab | 0.178 | -0.32 |
| IFNg | 0.024 | 0.265 |
| IFNg_GMCSF1 | 0.795 | 0.0 |
| Rv1432_day32 | 0.314 | -0.502 |
| Rv1565c_day32 | -2.443 | -1.38 |
| secA2_input | 0.36 | -0.153 |
| delta_Rv3594 | 0.45 | -0.272 |
| delta_Rv3717 | -0.011 | -0.516 |
| delta_Rv3811 | 0.109 | -0.302 |
| delta_Rv0954 | 0.205 | -0.037 |
| PonA1 | 0.749 | -0.344 |
| EccD1_KO | -0.118 | 0.322 |
| EspI_KO | -0.06 | 0.913 |
| PE35_KO | -0.528 | -0.636 |
| PPE68_KO | -0.378 | -0.496 |
| glycerol2 | 0.668 | 1.389 |
| lignocerate | 1.269 | 1.508 |
| oleate | -0.123 | -0.614 |
| phosphatidylcholine | 0.859 | 1.148 |
| acetate | 1.322 | 1.207 |
| glucAc | 1.325 | 1.174 |
| Rv0950ko | 0.289 | 0.757 |
| Rv1096ko | -0.642 | 0.157 |
| Rv3684ko | -1.002 | -0.626 |
| delta_otsA_trehalose | 0.706 | 2.496 |