Top 10 genes with highest correlation to Rv1749c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1526c/- | (cc=0.5462) | info on Rv1526c/- |
| Rv3213c/- | (cc=0.5165) | info on Rv3213c/- |
| Rv3429/PPE59 | (cc=0.5102) | info on Rv3429/PPE59 |
| Rv1583c/- | (cc=0.5057) | info on Rv1583c/- |
| Rv0028/- | (cc=0.5054) | info on Rv0028/- |
| Rv0042c/- | (cc=0.4944) | info on Rv0042c/- |
| Rv3217c/- | (cc=0.4881) | info on Rv3217c/- |
| Rv2237/- | (cc=0.4811) | info on Rv2237/- |
| Rv1981c/nrdF1 | (cc=0.4701) | info on Rv1981c/nrdF1 |
| Rv0432/sodC | (cc=0.47) | info on Rv0432/sodC |
Correlation of Rv1749c/- with Rv0432/sodC
Normalized LFCs for Rv1749c/-:
(description and provenance of datasets)
| Rv1749c/- | Rv0432/sodC | |
| Fe_supp_jason_reseq | 0.218 | 0.606 |
| low_pH_jason_reseq | 0.11 | 0.609 |
| NO_jason_reseq | 0.278 | 0.289 |
| B6_jason_reseq | -0.818 | -1.779 |
| MHCII_jason_reseq | -0.357 | -1.466 |
| Isoniazid02 | -0.445 | -0.554 |
| Rifampicin4 | -0.542 | -1.752 |
| Ethambutol3 | -0.158 | -0.255 |
| Meropenem3 | 0.097 | -0.546 |
| Vancomycin16 | -0.366 | -1.21 |
| Rv2680_day32 | -1.062 | 0.147 |
| H37Rv_KO_MarP | -0.278 | 0.262 |
| hypoxia_3wks | -0.666 | -1.332 |
| hypoxia_6wks | -0.714 | -1.234 |
| glycerol | -1.006 | -0.696 |
| cholesterol | -0.46 | -0.31 |
| AJ | -0.05 | -1.519 |
| Bibs02 | -0.378 | -0.705 |
| Bibs02c | -0.139 | -0.762 |
| BL6 | 1.067 | 0.12 |
| BL6a | 0.242 | -0.257 |
| BXD01 | 0.192 | -0.753 |
| BXD010 | 0.787 | 0.518 |
| BXD011 | 0.486 | -0.25 |
| BXD03 | -0.291 | -0.886 |
| BXD04 | -0.064 | -1.171 |
| BXD05 | 0.642 | -1.014 |
| BXD06 | 0.111 | -0.382 |
| BXD07 | 0.57 | -0.061 |
| BXD08 | 0.547 | -0.54 |
| BXD09 | 0.268 | -0.062 |
| CAST | -0.118 | -1.91 |
| CCcont | 0.844 | 0.402 |
| DS01 | 0.149 | -1.745 |
| DS02 | 0.334 | -0.602 |
| DS04 | 0.537 | -1.872 |
| DS0c | 0.223 | -1.226 |
| GP01 | 1.649 | -0.292 |
| GP02 | 0.6 | -0.491 |
| GP0c | 1.255 | 0.254 |
| NOD | 0.094 | -1.298 |
| NZO | -0.276 | -0.21 |
| PWK | -0.207 | -1.823 |
| H37Rv_KO_CtpC | -0.791 | -0.42 |
| H37Rv_KO_CtpD | 0.967 | 0.185 |
| H37Rv_KO_Rv1272 | -0.149 | -0.697 |
| H37Rv_KO_SugABC | 1.05 | 0.609 |
| H37Rv_KO_MbtN | -0.061 | -0.345 |
| Trans05 | 0.913 | -1.436 |
| macrophage_unactivated | -0.196 | -0.833 |
| IL1 | -0.43 | 0.587 |
| Rapamycin | -0.301 | 0.11 |
| Tcell | -0.029 | 0.117 |
| GMCSF | 0.327 | -0.177 |
| IFNab | 0.178 | 0.193 |
| IFNg | 0.024 | 0.826 |
| IFNg_GMCSF1 | 0.795 | 0.113 |
| Rv1432_day32 | 0.314 | -1.246 |
| Rv1565c_day32 | -2.443 | -2.504 |
| secA2_input | 0.36 | -0.985 |
| delta_Rv3594 | 0.45 | 0.333 |
| delta_Rv3717 | -0.011 | -0.092 |
| delta_Rv3811 | 0.109 | 0.739 |
| delta_Rv0954 | 0.205 | 0.078 |
| PonA1 | 0.749 | 0.615 |
| EccD1_KO | -0.118 | -0.829 |
| EspI_KO | -0.06 | -0.95 |
| PE35_KO | -0.528 | -1.604 |
| PPE68_KO | -0.378 | -1.315 |
| glycerol2 | 0.668 | 0.464 |
| lignocerate | 1.269 | 0.991 |
| oleate | -0.123 | -0.44 |
| phosphatidylcholine | 0.859 | 1.158 |
| acetate | 1.322 | 1.049 |
| glucAc | 1.325 | 0.668 |
| Rv0950ko | 0.289 | 0.479 |
| Rv1096ko | -0.642 | 0.721 |
| Rv3684ko | -1.002 | 0.37 |
| delta_otsA_trehalose | 0.706 | 0.849 |