Top 10 genes with highest correlation to Rv1679/fadE16:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2758c/vapB21 | (cc=0.5093) | info on Rv2758c/vapB21 |
| Rv2060/- | (cc=0.4901) | info on Rv2060/- |
| Rv0945/- | (cc=0.439) | info on Rv0945/- |
| Rv2813/- | (cc=0.4334) | info on Rv2813/- |
| Rv0312/- | (cc=0.4329) | info on Rv0312/- |
| Rv2151c/ftsQ | (cc=0.4325) | info on Rv2151c/ftsQ |
| Rv2609c/- | (cc=0.4305) | info on Rv2609c/- |
| Rv2970A/- | (cc=0.4277) | info on Rv2970A/- |
| Rv2481c/- | (cc=0.4156) | info on Rv2481c/- |
| Rv1499/- | (cc=0.4152) | info on Rv1499/- |
Correlation of Rv1679/fadE16 with Rv0945/-
Normalized LFCs for Rv1679/fadE16:
(description and provenance of datasets)
| Rv1679/fadE16 | Rv0945/- | |
| Fe_supp_jason_reseq | 0.834 | -1.432 |
| low_pH_jason_reseq | 0.214 | 0.216 |
| NO_jason_reseq | -1.118 | -1.769 |
| B6_jason_reseq | -0.198 | -2.038 |
| MHCII_jason_reseq | -1.309 | -0.851 |
| Isoniazid02 | 0.131 | -0.141 |
| Rifampicin4 | -0.688 | -0.449 |
| Ethambutol3 | -0.524 | -0.479 |
| Meropenem3 | -0.304 | -0.285 |
| Vancomycin16 | 0.239 | 0.318 |
| Rv2680_day32 | -1.54 | 0.896 |
| H37Rv_KO_MarP | -0.528 | 0.265 |
| hypoxia_3wks | -0.933 | -2.333 |
| hypoxia_6wks | 0.217 | -1.979 |
| glycerol | 0.78 | 2.127 |
| cholesterol | -0.308 | -0.647 |
| AJ | -1.812 | -0.881 |
| Bibs02 | -1.537 | -1.592 |
| Bibs02c | -1.297 | -1.085 |
| BL6 | -0.034 | 0.723 |
| BL6a | -0.23 | -0.626 |
| BXD01 | 0.926 | 1.029 |
| BXD010 | 1.109 | -0.486 |
| BXD011 | 0.391 | -0.569 |
| BXD03 | -0.076 | -0.92 |
| BXD04 | -1.039 | 0.426 |
| BXD05 | 0.14 | -0.602 |
| BXD06 | 0.566 | 0.059 |
| BXD07 | 1.248 | -0.064 |
| BXD08 | -1.039 | 1.986 |
| BXD09 | 0.075 | -0.36 |
| CAST | -0.34 | -1.373 |
| CCcont | 1.019 | 2.31 |
| DS01 | -1.348 | 0.205 |
| DS02 | -0.391 | 0.364 |
| DS04 | -2.025 | -0.613 |
| DS0c | -0.949 | -1.672 |
| GP01 | -1.106 | 1.651 |
| GP02 | -0.752 | -0.213 |
| GP0c | -1.357 | 0.718 |
| NOD | -0.89 | -1.339 |
| NZO | -1.046 | -1.357 |
| PWK | -1.532 | -1.169 |
| H37Rv_KO_CtpC | -2.104 | 2.408 |
| H37Rv_KO_CtpD | -1.419 | -0.976 |
| H37Rv_KO_Rv1272 | 0.282 | 0.778 |
| H37Rv_KO_SugABC | -1.382 | -0.376 |
| H37Rv_KO_MbtN | -1.155 | -0.614 |
| Trans05 | 1.838 | 0.611 |
| macrophage_unactivated | 0.682 | 2.326 |
| IL1 | 0.136 | -0.78 |
| Rapamycin | 0.141 | -0.807 |
| Tcell | 2.522 | 2.63 |
| GMCSF | -0.388 | -0.694 |
| IFNab | -0.768 | 0.0 |
| IFNg | 0.355 | -0.703 |
| IFNg_GMCSF1 | 1.156 | 1.012 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | 1.166 | -0.247 |
| delta_Rv3594 | 0.312 | 0.369 |
| delta_Rv3717 | 0.115 | -0.174 |
| delta_Rv3811 | 0.57 | 0.805 |
| delta_Rv0954 | -1.649 | 1.455 |
| PonA1 | -0.712 | 0.212 |
| EccD1_KO | -0.546 | 0.25 |
| EspI_KO | -1.01 | 1.777 |
| PE35_KO | -0.283 | 0.0 |
| PPE68_KO | -0.646 | 0.586 |
| glycerol2 | 0.963 | 3.113 |
| lignocerate | 1.685 | 3.78 |
| oleate | -1.469 | -0.829 |
| phosphatidylcholine | 1.3 | 2.899 |
| acetate | 1.383 | 4.666 |
| glucAc | 1.675 | 3.978 |
| Rv0950ko | 1.375 | -0.09 |
| Rv1096ko | -0.528 | 0.0 |
| Rv3684ko | -0.573 | -0.96 |
| delta_otsA_trehalose | -0.103 | 0.0 |