Top 10 genes with highest correlation to Rv1679/fadE16:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2758c/vapB21 | (cc=0.5093) | info on Rv2758c/vapB21 |
| Rv2060/- | (cc=0.4901) | info on Rv2060/- |
| Rv0945/- | (cc=0.439) | info on Rv0945/- |
| Rv2813/- | (cc=0.4334) | info on Rv2813/- |
| Rv0312/- | (cc=0.4329) | info on Rv0312/- |
| Rv2151c/ftsQ | (cc=0.4325) | info on Rv2151c/ftsQ |
| Rv2609c/- | (cc=0.4305) | info on Rv2609c/- |
| Rv2970A/- | (cc=0.4277) | info on Rv2970A/- |
| Rv2481c/- | (cc=0.4156) | info on Rv2481c/- |
| Rv1499/- | (cc=0.4152) | info on Rv1499/- |
Correlation of Rv1679/fadE16 with Rv0312/-
Normalized LFCs for Rv1679/fadE16:
(description and provenance of datasets)
| Rv1679/fadE16 | Rv0312/- | |
| Fe_supp_jason_reseq | 0.834 | 0.638 |
| low_pH_jason_reseq | 0.214 | 0.331 |
| NO_jason_reseq | -1.118 | -0.113 |
| B6_jason_reseq | -0.198 | 0.135 |
| MHCII_jason_reseq | -1.309 | 0.678 |
| Isoniazid02 | 0.131 | 0.533 |
| Rifampicin4 | -0.688 | -2.296 |
| Ethambutol3 | -0.524 | 0.942 |
| Meropenem3 | -0.304 | -0.386 |
| Vancomycin16 | 0.239 | -2.406 |
| Rv2680_day32 | -1.54 | -1.374 |
| H37Rv_KO_MarP | -0.528 | 0.181 |
| hypoxia_3wks | -0.933 | -1.467 |
| hypoxia_6wks | 0.217 | -0.867 |
| glycerol | 0.78 | 0.619 |
| cholesterol | -0.308 | 0.223 |
| AJ | -1.812 | -0.771 |
| Bibs02 | -1.537 | 0.686 |
| Bibs02c | -1.297 | 0.235 |
| BL6 | -0.034 | 0.49 |
| BL6a | -0.23 | 0.264 |
| BXD01 | 0.926 | -0.476 |
| BXD010 | 1.109 | 0.897 |
| BXD011 | 0.391 | 0.297 |
| BXD03 | -0.076 | 0.263 |
| BXD04 | -1.039 | -0.156 |
| BXD05 | 0.14 | -0.135 |
| BXD06 | 0.566 | -0.168 |
| BXD07 | 1.248 | -0.46 |
| BXD08 | -1.039 | -0.358 |
| BXD09 | 0.075 | -0.216 |
| CAST | -0.34 | 0.402 |
| CCcont | 1.019 | 0.746 |
| DS01 | -1.348 | -0.056 |
| DS02 | -0.391 | -0.274 |
| DS04 | -2.025 | -1.228 |
| DS0c | -0.949 | -0.052 |
| GP01 | -1.106 | -0.396 |
| GP02 | -0.752 | 0.255 |
| GP0c | -1.357 | -0.614 |
| NOD | -0.89 | -1.147 |
| NZO | -1.046 | -1.019 |
| PWK | -1.532 | -1.159 |
| H37Rv_KO_CtpC | -2.104 | -0.12 |
| H37Rv_KO_CtpD | -1.419 | -0.03 |
| H37Rv_KO_Rv1272 | 0.282 | -1.022 |
| H37Rv_KO_SugABC | -1.382 | 0.286 |
| H37Rv_KO_MbtN | -1.155 | -0.85 |
| Trans05 | 1.838 | -1.147 |
| macrophage_unactivated | 0.682 | -0.489 |
| IL1 | 0.136 | -0.658 |
| Rapamycin | 0.141 | 0.178 |
| Tcell | 2.522 | 0.094 |
| GMCSF | -0.388 | 0.227 |
| IFNab | -0.768 | -0.372 |
| IFNg | 0.355 | 0.0 |
| IFNg_GMCSF1 | 1.156 | -0.591 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | 1.166 | 0.0 |
| delta_Rv3594 | 0.312 | 0.646 |
| delta_Rv3717 | 0.115 | 0.505 |
| delta_Rv3811 | 0.57 | 0.752 |
| delta_Rv0954 | -1.649 | -0.115 |
| PonA1 | -0.712 | 0.653 |
| EccD1_KO | -0.546 | -1.016 |
| EspI_KO | -1.01 | -1.135 |
| PE35_KO | -0.283 | -1.228 |
| PPE68_KO | -0.646 | -0.921 |
| glycerol2 | 0.963 | 2.019 |
| lignocerate | 1.685 | 2.557 |
| oleate | -1.469 | -0.315 |
| phosphatidylcholine | 1.3 | 2.07 |
| acetate | 1.383 | 3.325 |
| glucAc | 1.675 | 2.617 |
| Rv0950ko | 1.375 | 1.668 |
| Rv1096ko | -0.528 | 0.875 |
| Rv3684ko | -0.573 | 0.684 |
| delta_otsA_trehalose | -0.103 | 0.079 |