Top 10 genes with highest correlation to Rv1471/trxB1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2544/lppB | (cc=0.6987) | info on Rv2544/lppB |
| Rv0495c/- | (cc=0.6096) | info on Rv0495c/- |
| Rv1987/- | (cc=0.5731) | info on Rv1987/- |
| Rv2078/- | (cc=0.569) | info on Rv2078/- |
| Rv0590A/- | (cc=0.5689) | info on Rv0590A/- |
| Rv0109/PE_PGRS1 | (cc=0.5578) | info on Rv0109/PE_PGRS1 |
| Rv2281/pitB | (cc=0.5545) | info on Rv2281/pitB |
| Rv0055/rpsR1 | (cc=0.5436) | info on Rv0055/rpsR1 |
| Rv1604/impA | (cc=0.5435) | info on Rv1604/impA |
| Rv3287c/rsbW | (cc=0.5432) | info on Rv3287c/rsbW |
Correlation of Rv1471/trxB1 with Rv2078/-
Normalized LFCs for Rv1471/trxB1:
(description and provenance of datasets)
| Rv1471/trxB1 | Rv2078/- | |
| Fe_supp_jason_reseq | -1.092 | -1.478 |
| low_pH_jason_reseq | -0.035 | 1.154 |
| NO_jason_reseq | -0.242 | -3.715 |
| B6_jason_reseq | -1.221 | -1.004 |
| MHCII_jason_reseq | -2.743 | -1.831 |
| Isoniazid02 | 0.432 | 0.648 |
| Rifampicin4 | -1.313 | 0.211 |
| Ethambutol3 | 0.133 | -0.505 |
| Meropenem3 | -0.465 | -0.701 |
| Vancomycin16 | 0.34 | 0.499 |
| Rv2680_day32 | 0.343 | 0.0 |
| H37Rv_KO_MarP | -0.665 | 1.411 |
| hypoxia_3wks | -1.188 | -1.655 |
| hypoxia_6wks | 1.232 | 2.629 |
| glycerol | 2.319 | -2.499 |
| cholesterol | 0.532 | -2.008 |
| AJ | 1.743 | -0.316 |
| Bibs02 | -0.158 | 1.325 |
| Bibs02c | -0.446 | -0.674 |
| BL6 | 3.592 | 0.307 |
| BL6a | 2.91 | 0.042 |
| BXD01 | 0.812 | 2.42 |
| BXD010 | 2.067 | 0.379 |
| BXD011 | 2.63 | 1.575 |
| BXD03 | 2.354 | 0.189 |
| BXD04 | 2.435 | -0.472 |
| BXD05 | 3.599 | -0.151 |
| BXD06 | 2.481 | 2.187 |
| BXD07 | 2.685 | 0.673 |
| BXD08 | 2.983 | 0.782 |
| BXD09 | 2.301 | 1.71 |
| CAST | 1.605 | 0.752 |
| CCcont | 2.453 | 1.474 |
| DS01 | 1.324 | 0.286 |
| DS02 | 0.961 | -0.296 |
| DS04 | -0.932 | 0.89 |
| DS0c | -0.613 | 0.343 |
| GP01 | -1.378 | -1.64 |
| GP02 | -1.161 | -1.382 |
| GP0c | -1.684 | -2.16 |
| NOD | -0.26 | 1.347 |
| NZO | 1.604 | -0.043 |
| PWK | 2.083 | 1.712 |
| H37Rv_KO_CtpC | 3.258 | 2.69 |
| H37Rv_KO_CtpD | 1.628 | -2.104 |
| H37Rv_KO_Rv1272 | 3.897 | 2.043 |
| H37Rv_KO_SugABC | 1.335 | 2.4 |
| H37Rv_KO_MbtN | -0.408 | 0.369 |
| Trans05 | 1.81 | 1.844 |
| macrophage_unactivated | -0.211 | 0.969 |
| IL1 | 1.124 | -1.157 |
| Rapamycin | 0.328 | -0.902 |
| Tcell | 0.961 | 2.805 |
| GMCSF | -1.188 | -1.912 |
| IFNab | 0.432 | -1.826 |
| IFNg | 1.457 | -1.462 |
| IFNg_GMCSF1 | 0.0 | -3.026 |
| Rv1432_day32 | 0.0 | -0.583 |
| Rv1565c_day32 | 1.087 | 0.0 |
| secA2_input | -0.266 | 2.129 |
| delta_Rv3594 | 0.089 | 0.069 |
| delta_Rv3717 | 2.29 | 1.576 |
| delta_Rv3811 | 2.127 | -2.357 |
| delta_Rv0954 | 1.957 | -1.096 |
| PonA1 | -0.608 | -0.56 |
| EccD1_KO | -0.062 | -0.148 |
| EspI_KO | 0.305 | -1.246 |
| PE35_KO | 1.003 | 1.275 |
| PPE68_KO | 1.328 | 1.238 |
| glycerol2 | 3.213 | 4.047 |
| lignocerate | 3.899 | 4.212 |
| oleate | 0.688 | 0.0 |
| phosphatidylcholine | 3.039 | 3.961 |
| acetate | 5.878 | 5.772 |
| glucAc | 4.496 | 4.399 |
| Rv0950ko | 1.481 | -0.742 |
| Rv1096ko | 0.552 | -0.401 |
| Rv3684ko | -0.354 | -0.141 |
| delta_otsA_trehalose | -0.27 | -1.452 |