Top 10 genes with highest correlation to Rv1471/trxB1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2544/lppB | (cc=0.6987) | info on Rv2544/lppB |
| Rv0495c/- | (cc=0.6096) | info on Rv0495c/- |
| Rv1987/- | (cc=0.5731) | info on Rv1987/- |
| Rv2078/- | (cc=0.569) | info on Rv2078/- |
| Rv0590A/- | (cc=0.5689) | info on Rv0590A/- |
| Rv0109/PE_PGRS1 | (cc=0.5578) | info on Rv0109/PE_PGRS1 |
| Rv2281/pitB | (cc=0.5545) | info on Rv2281/pitB |
| Rv0055/rpsR1 | (cc=0.5436) | info on Rv0055/rpsR1 |
| Rv1604/impA | (cc=0.5435) | info on Rv1604/impA |
| Rv3287c/rsbW | (cc=0.5432) | info on Rv3287c/rsbW |
Correlation of Rv1471/trxB1 with Rv0055/rpsR1
Normalized LFCs for Rv1471/trxB1:
(description and provenance of datasets)
| Rv1471/trxB1 | Rv0055/rpsR1 | |
| Fe_supp_jason_reseq | -1.092 | -1.37 |
| low_pH_jason_reseq | -0.035 | 3.369 |
| NO_jason_reseq | -0.242 | 2.57 |
| B6_jason_reseq | -1.221 | -0.657 |
| MHCII_jason_reseq | -2.743 | 1.143 |
| Isoniazid02 | 0.432 | 2.663 |
| Rifampicin4 | -1.313 | 0.902 |
| Ethambutol3 | 0.133 | -0.441 |
| Meropenem3 | -0.465 | 0.763 |
| Vancomycin16 | 0.34 | -0.294 |
| Rv2680_day32 | 0.343 | 0.109 |
| H37Rv_KO_MarP | -0.665 | -1.325 |
| hypoxia_3wks | -1.188 | -0.678 |
| hypoxia_6wks | 1.232 | 0.084 |
| glycerol | 2.319 | 0.97 |
| cholesterol | 0.532 | -0.276 |
| AJ | 1.743 | 0.983 |
| Bibs02 | -0.158 | 0.0 |
| Bibs02c | -0.446 | 0.336 |
| BL6 | 3.592 | 3.526 |
| BL6a | 2.91 | 3.297 |
| BXD01 | 0.812 | 5.013 |
| BXD010 | 2.067 | 4.197 |
| BXD011 | 2.63 | 5.786 |
| BXD03 | 2.354 | 3.889 |
| BXD04 | 2.435 | 6.0 |
| BXD05 | 3.599 | 4.896 |
| BXD06 | 2.481 | 4.527 |
| BXD07 | 2.685 | 4.203 |
| BXD08 | 2.983 | 5.838 |
| BXD09 | 2.301 | 4.442 |
| CAST | 1.605 | 3.287 |
| CCcont | 2.453 | 3.633 |
| DS01 | 1.324 | 1.381 |
| DS02 | 0.961 | 0.181 |
| DS04 | -0.932 | -0.177 |
| DS0c | -0.613 | 0.0 |
| GP01 | -1.378 | -0.188 |
| GP02 | -1.161 | 0.0 |
| GP0c | -1.684 | -0.248 |
| NOD | -0.26 | 3.817 |
| NZO | 1.604 | -0.182 |
| PWK | 2.083 | 3.083 |
| H37Rv_KO_CtpC | 3.258 | 1.611 |
| H37Rv_KO_CtpD | 1.628 | 1.594 |
| H37Rv_KO_Rv1272 | 3.897 | 2.661 |
| H37Rv_KO_SugABC | 1.335 | -0.189 |
| H37Rv_KO_MbtN | -0.408 | 1.153 |
| Trans05 | 1.81 | 3.074 |
| macrophage_unactivated | -0.211 | 0.0 |
| IL1 | 1.124 | -0.54 |
| Rapamycin | 0.328 | -0.077 |
| Tcell | 0.961 | 1.717 |
| GMCSF | -1.188 | -1.677 |
| IFNab | 0.432 | -0.076 |
| IFNg | 1.457 | -1.31 |
| IFNg_GMCSF1 | 0.0 | -2.916 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 1.087 | -0.415 |
| secA2_input | -0.266 | 0.997 |
| delta_Rv3594 | 0.089 | -0.812 |
| delta_Rv3717 | 2.29 | -4.252 |
| delta_Rv3811 | 2.127 | -0.106 |
| delta_Rv0954 | 1.957 | -4.366 |
| PonA1 | -0.608 | -1.721 |
| EccD1_KO | -0.062 | -2.578 |
| EspI_KO | 0.305 | 0.0 |
| PE35_KO | 1.003 | 0.134 |
| PPE68_KO | 1.328 | 0.941 |
| glycerol2 | 3.213 | 2.948 |
| lignocerate | 3.899 | 3.955 |
| oleate | 0.688 | -1.418 |
| phosphatidylcholine | 3.039 | 3.751 |
| acetate | 5.878 | 4.357 |
| glucAc | 4.496 | 3.813 |
| Rv0950ko | 1.481 | -0.944 |
| Rv1096ko | 0.552 | -1.08 |
| Rv3684ko | -0.354 | 2.391 |
| delta_otsA_trehalose | -0.27 | 0.0 |