Top 10 genes with highest correlation to Rv1335/cysO:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1336/cysM | (cc=0.7759) | info on Rv1336/cysM |
| Rv1333/- | (cc=0.759) | info on Rv1333/- |
| Rv1337/- | (cc=0.7146) | info on Rv1337/- |
| Rv0502/- | (cc=0.7142) | info on Rv0502/- |
| Rv1334/mec | (cc=0.6962) | info on Rv1334/mec |
| Rv3218/- | (cc=0.6776) | info on Rv3218/- |
| Rv0642c/mmaA4 | (cc=0.6629) | info on Rv0642c/mmaA4 |
| Rv3842c/glpQ1 | (cc=0.6564) | info on Rv3842c/glpQ1 |
| Rv0644c/mmaA2 | (cc=0.6525) | info on Rv0644c/mmaA2 |
| Rv0645c/mmaA1 | (cc=0.6277) | info on Rv0645c/mmaA1 |
Correlation of Rv1335/cysO with Rv3842c/glpQ1
Normalized LFCs for Rv1335/cysO:
(description and provenance of datasets)
| Rv1335/cysO | Rv3842c/glpQ1 | |
| Fe_supp_jason_reseq | -0.205 | -2.242 |
| low_pH_jason_reseq | 1.85 | 0.574 |
| NO_jason_reseq | 1.273 | 3.631 |
| B6_jason_reseq | 1.058 | 1.38 |
| MHCII_jason_reseq | -0.572 | -0.853 |
| Isoniazid02 | -0.207 | 0.288 |
| Rifampicin4 | 1.145 | -0.33 |
| Ethambutol3 | -1.267 | 2.837 |
| Meropenem3 | -0.089 | -0.259 |
| Vancomycin16 | 0.377 | 0.146 |
| Rv2680_day32 | -0.382 | 1.647 |
| H37Rv_KO_MarP | -0.628 | -1.617 |
| hypoxia_3wks | 1.547 | -1.519 |
| hypoxia_6wks | 2.76 | 1.675 |
| glycerol | -1.404 | 0.016 |
| cholesterol | -1.103 | -0.252 |
| AJ | -0.819 | 0.528 |
| Bibs02 | -0.375 | -0.551 |
| Bibs02c | 1.058 | -1.51 |
| BL6 | 1.805 | 1.67 |
| BL6a | 1.578 | 2.716 |
| BXD01 | 1.794 | 3.451 |
| BXD010 | 2.143 | 2.506 |
| BXD011 | 2.581 | 4.887 |
| BXD03 | 1.328 | 1.946 |
| BXD04 | 1.063 | 3.768 |
| BXD05 | 2.237 | 2.897 |
| BXD06 | 1.975 | 3.915 |
| BXD07 | 1.892 | 3.764 |
| BXD08 | 1.74 | 3.535 |
| BXD09 | 1.611 | 3.421 |
| CAST | -1.974 | 1.655 |
| CCcont | 0.075 | -0.279 |
| DS01 | -0.809 | -2.566 |
| DS02 | -1.09 | -3.052 |
| DS04 | 0.655 | -0.749 |
| DS0c | -0.754 | -1.941 |
| GP01 | 1.708 | 3.019 |
| GP02 | 3.674 | 2.711 |
| GP0c | 1.509 | 3.642 |
| NOD | -0.605 | 0.085 |
| NZO | 1.053 | 1.361 |
| PWK | -1.204 | 3.319 |
| H37Rv_KO_CtpC | 0.487 | -0.514 |
| H37Rv_KO_CtpD | 1.144 | 0.058 |
| H37Rv_KO_Rv1272 | 1.102 | 0.94 |
| H37Rv_KO_SugABC | 2.017 | 1.215 |
| H37Rv_KO_MbtN | 1.675 | 2.418 |
| Trans05 | 1.853 | 1.7 |
| macrophage_unactivated | -1.016 | -3.043 |
| IL1 | -0.448 | 0.409 |
| Rapamycin | 0.114 | -0.497 |
| Tcell | -0.329 | 0.378 |
| GMCSF | -1.803 | -2.764 |
| IFNab | -0.272 | -0.327 |
| IFNg | -0.275 | -1.139 |
| IFNg_GMCSF1 | -0.867 | -1.339 |
| Rv1432_day32 | 1.035 | 3.437 |
| Rv1565c_day32 | -1.854 | -3.047 |
| secA2_input | -1.025 | 0.528 |
| delta_Rv3594 | -0.289 | 0.229 |
| delta_Rv3717 | 1.003 | 2.504 |
| delta_Rv3811 | -0.083 | 1.028 |
| delta_Rv0954 | -1.016 | -2.01 |
| PonA1 | -1.772 | -2.098 |
| EccD1_KO | -0.924 | -1.687 |
| EspI_KO | 0.108 | -1.928 |
| PE35_KO | -1.68 | -2.091 |
| PPE68_KO | -1.459 | -2.278 |
| glycerol2 | -0.37 | 0.205 |
| lignocerate | -1.583 | -1.063 |
| oleate | 2.205 | -0.284 |
| phosphatidylcholine | -0.919 | -0.633 |
| acetate | 0.165 | -0.372 |
| glucAc | -0.703 | -0.425 |
| Rv0950ko | -0.163 | -1.08 |
| Rv1096ko | -0.787 | -0.935 |
| Rv3684ko | -0.233 | 0.521 |
| delta_otsA_trehalose | 1.062 | 0.282 |