Top 10 genes with highest correlation to Rv1335/cysO:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1336/cysM | (cc=0.7759) | info on Rv1336/cysM |
| Rv1333/- | (cc=0.759) | info on Rv1333/- |
| Rv1337/- | (cc=0.7146) | info on Rv1337/- |
| Rv0502/- | (cc=0.7142) | info on Rv0502/- |
| Rv1334/mec | (cc=0.6962) | info on Rv1334/mec |
| Rv3218/- | (cc=0.6776) | info on Rv3218/- |
| Rv0642c/mmaA4 | (cc=0.6629) | info on Rv0642c/mmaA4 |
| Rv3842c/glpQ1 | (cc=0.6564) | info on Rv3842c/glpQ1 |
| Rv0644c/mmaA2 | (cc=0.6525) | info on Rv0644c/mmaA2 |
| Rv0645c/mmaA1 | (cc=0.6277) | info on Rv0645c/mmaA1 |
Correlation of Rv1335/cysO with Rv1333/-
Normalized LFCs for Rv1335/cysO:
(description and provenance of datasets)
| Rv1335/cysO | Rv1333/- | |
| Fe_supp_jason_reseq | -0.205 | 0.259 |
| low_pH_jason_reseq | 1.85 | 0.161 |
| NO_jason_reseq | 1.273 | 0.819 |
| B6_jason_reseq | 1.058 | -0.371 |
| MHCII_jason_reseq | -0.572 | 0.363 |
| Isoniazid02 | -0.207 | -0.631 |
| Rifampicin4 | 1.145 | 1.032 |
| Ethambutol3 | -1.267 | -1.364 |
| Meropenem3 | -0.089 | -0.654 |
| Vancomycin16 | 0.377 | 0.531 |
| Rv2680_day32 | -0.382 | 0.36 |
| H37Rv_KO_MarP | -0.628 | -0.557 |
| hypoxia_3wks | 1.547 | 0.941 |
| hypoxia_6wks | 2.76 | 1.351 |
| glycerol | -1.404 | -0.718 |
| cholesterol | -1.103 | 0.574 |
| AJ | -0.819 | -1.375 |
| Bibs02 | -0.375 | -0.898 |
| Bibs02c | 1.058 | -0.153 |
| BL6 | 1.805 | 0.9 |
| BL6a | 1.578 | 0.865 |
| BXD01 | 1.794 | 1.833 |
| BXD010 | 2.143 | 1.317 |
| BXD011 | 2.581 | 1.36 |
| BXD03 | 1.328 | 1.786 |
| BXD04 | 1.063 | 1.307 |
| BXD05 | 2.237 | 1.887 |
| BXD06 | 1.975 | 1.352 |
| BXD07 | 1.892 | 1.468 |
| BXD08 | 1.74 | 1.477 |
| BXD09 | 1.611 | 1.215 |
| CAST | -1.974 | -1.094 |
| CCcont | 0.075 | 1.089 |
| DS01 | -0.809 | -0.775 |
| DS02 | -1.09 | -0.654 |
| DS04 | 0.655 | -0.121 |
| DS0c | -0.754 | -0.624 |
| GP01 | 1.708 | 1.29 |
| GP02 | 3.674 | 0.762 |
| GP0c | 1.509 | 1.388 |
| NOD | -0.605 | -1.865 |
| NZO | 1.053 | -0.189 |
| PWK | -1.204 | -0.871 |
| H37Rv_KO_CtpC | 0.487 | -0.578 |
| H37Rv_KO_CtpD | 1.144 | 0.336 |
| H37Rv_KO_Rv1272 | 1.102 | 1.244 |
| H37Rv_KO_SugABC | 2.017 | 1.968 |
| H37Rv_KO_MbtN | 1.675 | 1.498 |
| Trans05 | 1.853 | 0.051 |
| macrophage_unactivated | -1.016 | -0.492 |
| IL1 | -0.448 | 0.596 |
| Rapamycin | 0.114 | 0.853 |
| Tcell | -0.329 | 0.688 |
| GMCSF | -1.803 | -0.565 |
| IFNab | -0.272 | 0.441 |
| IFNg | -0.275 | 0.334 |
| IFNg_GMCSF1 | -0.867 | 0.157 |
| Rv1432_day32 | 1.035 | 0.595 |
| Rv1565c_day32 | -1.854 | -0.753 |
| secA2_input | -1.025 | 0.083 |
| delta_Rv3594 | -0.289 | 0.971 |
| delta_Rv3717 | 1.003 | 1.592 |
| delta_Rv3811 | -0.083 | 0.708 |
| delta_Rv0954 | -1.016 | -0.548 |
| PonA1 | -1.772 | -0.517 |
| EccD1_KO | -0.924 | -0.895 |
| EspI_KO | 0.108 | -0.804 |
| PE35_KO | -1.68 | -1.304 |
| PPE68_KO | -1.459 | -0.969 |
| glycerol2 | -0.37 | -0.184 |
| lignocerate | -1.583 | -0.728 |
| oleate | 2.205 | 2.294 |
| phosphatidylcholine | -0.919 | -0.541 |
| acetate | 0.165 | -0.288 |
| glucAc | -0.703 | 0.446 |
| Rv0950ko | -0.163 | -0.413 |
| Rv1096ko | -0.787 | 0.054 |
| Rv3684ko | -0.233 | -0.481 |
| delta_otsA_trehalose | 1.062 | 0.747 |