Top 10 genes with highest correlation to Rv1335/cysO:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1336/cysM | (cc=0.7759) | info on Rv1336/cysM |
| Rv1333/- | (cc=0.759) | info on Rv1333/- |
| Rv1337/- | (cc=0.7146) | info on Rv1337/- |
| Rv0502/- | (cc=0.7142) | info on Rv0502/- |
| Rv1334/mec | (cc=0.6962) | info on Rv1334/mec |
| Rv3218/- | (cc=0.6776) | info on Rv3218/- |
| Rv0642c/mmaA4 | (cc=0.6629) | info on Rv0642c/mmaA4 |
| Rv3842c/glpQ1 | (cc=0.6564) | info on Rv3842c/glpQ1 |
| Rv0644c/mmaA2 | (cc=0.6525) | info on Rv0644c/mmaA2 |
| Rv0645c/mmaA1 | (cc=0.6277) | info on Rv0645c/mmaA1 |
Correlation of Rv1335/cysO with Rv3218/-
Normalized LFCs for Rv1335/cysO:
(description and provenance of datasets)
| Rv1335/cysO | Rv3218/- | |
| Fe_supp_jason_reseq | -0.205 | 0.069 |
| low_pH_jason_reseq | 1.85 | 0.626 |
| NO_jason_reseq | 1.273 | -0.039 |
| B6_jason_reseq | 1.058 | 0.103 |
| MHCII_jason_reseq | -0.572 | -0.977 |
| Isoniazid02 | -0.207 | -0.997 |
| Rifampicin4 | 1.145 | -0.479 |
| Ethambutol3 | -1.267 | -0.966 |
| Meropenem3 | -0.089 | -0.543 |
| Vancomycin16 | 0.377 | -1.167 |
| Rv2680_day32 | -0.382 | 0.234 |
| H37Rv_KO_MarP | -0.628 | 0.319 |
| hypoxia_3wks | 1.547 | 0.502 |
| hypoxia_6wks | 2.76 | 0.833 |
| glycerol | -1.404 | -0.357 |
| cholesterol | -1.103 | 0.85 |
| AJ | -0.819 | -0.338 |
| Bibs02 | -0.375 | 0.211 |
| Bibs02c | 1.058 | 0.317 |
| BL6 | 1.805 | 1.984 |
| BL6a | 1.578 | 1.934 |
| BXD01 | 1.794 | 2.36 |
| BXD010 | 2.143 | 2.075 |
| BXD011 | 2.581 | 2.479 |
| BXD03 | 1.328 | 1.262 |
| BXD04 | 1.063 | 2.489 |
| BXD05 | 2.237 | 2.15 |
| BXD06 | 1.975 | 2.326 |
| BXD07 | 1.892 | 2.605 |
| BXD08 | 1.74 | 1.872 |
| BXD09 | 1.611 | 2.198 |
| CAST | -1.974 | -0.299 |
| CCcont | 0.075 | 0.557 |
| DS01 | -0.809 | -0.2 |
| DS02 | -1.09 | 0.225 |
| DS04 | 0.655 | 0.51 |
| DS0c | -0.754 | 0.303 |
| GP01 | 1.708 | 1.142 |
| GP02 | 3.674 | 1.904 |
| GP0c | 1.509 | 1.108 |
| NOD | -0.605 | -0.586 |
| NZO | 1.053 | 1.334 |
| PWK | -1.204 | 1.225 |
| H37Rv_KO_CtpC | 0.487 | 0.148 |
| H37Rv_KO_CtpD | 1.144 | 1.334 |
| H37Rv_KO_Rv1272 | 1.102 | 1.52 |
| H37Rv_KO_SugABC | 2.017 | 1.485 |
| H37Rv_KO_MbtN | 1.675 | 2.303 |
| Trans05 | 1.853 | 1.743 |
| macrophage_unactivated | -1.016 | -0.628 |
| IL1 | -0.448 | 0.561 |
| Rapamycin | 0.114 | 0.822 |
| Tcell | -0.329 | 0.075 |
| GMCSF | -1.803 | 0.906 |
| IFNab | -0.272 | 0.045 |
| IFNg | -0.275 | 0.43 |
| IFNg_GMCSF1 | -0.867 | -0.487 |
| Rv1432_day32 | 1.035 | 0.963 |
| Rv1565c_day32 | -1.854 | -0.682 |
| secA2_input | -1.025 | 0.848 |
| delta_Rv3594 | -0.289 | -0.846 |
| delta_Rv3717 | 1.003 | 0.467 |
| delta_Rv3811 | -0.083 | -0.464 |
| delta_Rv0954 | -1.016 | -0.783 |
| PonA1 | -1.772 | -0.658 |
| EccD1_KO | -0.924 | -0.516 |
| EspI_KO | 0.108 | -1.144 |
| PE35_KO | -1.68 | -0.487 |
| PPE68_KO | -1.459 | -1.245 |
| glycerol2 | -0.37 | -0.859 |
| lignocerate | -1.583 | -1.679 |
| oleate | 2.205 | -1.16 |
| phosphatidylcholine | -0.919 | -1.931 |
| acetate | 0.165 | -0.6 |
| glucAc | -0.703 | -0.508 |
| Rv0950ko | -0.163 | 0.286 |
| Rv1096ko | -0.787 | 0.0 |
| Rv3684ko | -0.233 | 0.743 |
| delta_otsA_trehalose | 1.062 | 2.083 |