Top 10 genes with highest correlation to Rv1335/cysO:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1336/cysM | (cc=0.7759) | info on Rv1336/cysM |
| Rv1333/- | (cc=0.759) | info on Rv1333/- |
| Rv1337/- | (cc=0.7146) | info on Rv1337/- |
| Rv0502/- | (cc=0.7142) | info on Rv0502/- |
| Rv1334/mec | (cc=0.6962) | info on Rv1334/mec |
| Rv3218/- | (cc=0.6776) | info on Rv3218/- |
| Rv0642c/mmaA4 | (cc=0.6629) | info on Rv0642c/mmaA4 |
| Rv3842c/glpQ1 | (cc=0.6564) | info on Rv3842c/glpQ1 |
| Rv0644c/mmaA2 | (cc=0.6525) | info on Rv0644c/mmaA2 |
| Rv0645c/mmaA1 | (cc=0.6277) | info on Rv0645c/mmaA1 |
Correlation of Rv1335/cysO with Rv0644c/mmaA2
Normalized LFCs for Rv1335/cysO:
(description and provenance of datasets)
| Rv1335/cysO | Rv0644c/mmaA2 | |
| Fe_supp_jason_reseq | -0.205 | -0.227 |
| low_pH_jason_reseq | 1.85 | 1.2 |
| NO_jason_reseq | 1.273 | 0.882 |
| B6_jason_reseq | 1.058 | 0.5 |
| MHCII_jason_reseq | -0.572 | -0.154 |
| Isoniazid02 | -0.207 | 0.963 |
| Rifampicin4 | 1.145 | -0.46 |
| Ethambutol3 | -1.267 | 2.038 |
| Meropenem3 | -0.089 | 0.24 |
| Vancomycin16 | 0.377 | 1.926 |
| Rv2680_day32 | -0.382 | 3.409 |
| H37Rv_KO_MarP | -0.628 | 0.831 |
| hypoxia_3wks | 1.547 | 3.688 |
| hypoxia_6wks | 2.76 | 4.063 |
| glycerol | -1.404 | -0.208 |
| cholesterol | -1.103 | -0.986 |
| AJ | -0.819 | 0.427 |
| Bibs02 | -0.375 | -0.621 |
| Bibs02c | 1.058 | -0.918 |
| BL6 | 1.805 | 2.082 |
| BL6a | 1.578 | 2.393 |
| BXD01 | 1.794 | 3.306 |
| BXD010 | 2.143 | 2.737 |
| BXD011 | 2.581 | 3.421 |
| BXD03 | 1.328 | 1.467 |
| BXD04 | 1.063 | 1.779 |
| BXD05 | 2.237 | 2.071 |
| BXD06 | 1.975 | 2.375 |
| BXD07 | 1.892 | 2.536 |
| BXD08 | 1.74 | 2.516 |
| BXD09 | 1.611 | 3.211 |
| CAST | -1.974 | 0.611 |
| CCcont | 0.075 | 0.434 |
| DS01 | -0.809 | -1.353 |
| DS02 | -1.09 | 0.203 |
| DS04 | 0.655 | 1.025 |
| DS0c | -0.754 | -0.332 |
| GP01 | 1.708 | 2.536 |
| GP02 | 3.674 | 2.939 |
| GP0c | 1.509 | 1.688 |
| NOD | -0.605 | 1.593 |
| NZO | 1.053 | 1.231 |
| PWK | -1.204 | -0.347 |
| H37Rv_KO_CtpC | 0.487 | 0.238 |
| H37Rv_KO_CtpD | 1.144 | 1.411 |
| H37Rv_KO_Rv1272 | 1.102 | 2.077 |
| H37Rv_KO_SugABC | 2.017 | 1.754 |
| H37Rv_KO_MbtN | 1.675 | 2.539 |
| Trans05 | 1.853 | 2.578 |
| macrophage_unactivated | -1.016 | -1.171 |
| IL1 | -0.448 | -0.326 |
| Rapamycin | 0.114 | -1.252 |
| Tcell | -0.329 | 1.665 |
| GMCSF | -1.803 | -0.914 |
| IFNab | -0.272 | -1.778 |
| IFNg | -0.275 | -1.547 |
| IFNg_GMCSF1 | -0.867 | -1.574 |
| Rv1432_day32 | 1.035 | 5.684 |
| Rv1565c_day32 | -1.854 | 0.229 |
| secA2_input | -1.025 | -0.753 |
| delta_Rv3594 | -0.289 | 0.817 |
| delta_Rv3717 | 1.003 | 2.513 |
| delta_Rv3811 | -0.083 | 1.089 |
| delta_Rv0954 | -1.016 | -0.756 |
| PonA1 | -1.772 | -1.215 |
| EccD1_KO | -0.924 | -1.681 |
| EspI_KO | 0.108 | -1.646 |
| PE35_KO | -1.68 | -1.555 |
| PPE68_KO | -1.459 | -2.332 |
| glycerol2 | -0.37 | 1.843 |
| lignocerate | -1.583 | 1.074 |
| oleate | 2.205 | 0.81 |
| phosphatidylcholine | -0.919 | 1.455 |
| acetate | 0.165 | 0.188 |
| glucAc | -0.703 | 0.068 |
| Rv0950ko | -0.163 | -0.178 |
| Rv1096ko | -0.787 | -1.246 |
| Rv3684ko | -0.233 | 0.2 |
| delta_otsA_trehalose | 1.062 | -1.578 |