Top 10 genes with highest correlation to Rv1287/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2467/pepN | (cc=0.7005) | info on Rv2467/pepN |
| Rv0561c/- | (cc=0.6926) | info on Rv0561c/- |
| Rv1323/fadA4 | (cc=0.6389) | info on Rv1323/fadA4 |
| Rv2563/- | (cc=0.634) | info on Rv2563/- |
| Rv0910/- | (cc=0.6298) | info on Rv0910/- |
| Rv0406c/- | (cc=0.628) | info on Rv0406c/- |
| Rv0634A/- | (cc=0.6274) | info on Rv0634A/- |
| Rv2258c/- | (cc=0.6125) | info on Rv2258c/- |
| Rv3041c/- | (cc=0.6091) | info on Rv3041c/- |
| Rv1473/- | (cc=0.6039) | info on Rv1473/- |
Correlation of Rv1287/- with Rv2258c/-
Normalized LFCs for Rv1287/-:
(description and provenance of datasets)
| Rv1287/- | Rv2258c/- | |
| Fe_supp_jason_reseq | 2.9 | 0.57 |
| low_pH_jason_reseq | 0.323 | -0.47 |
| NO_jason_reseq | -0.583 | -0.564 |
| B6_jason_reseq | 0.571 | -1.085 |
| MHCII_jason_reseq | 0.098 | 0.032 |
| Isoniazid02 | 0.805 | 0.607 |
| Rifampicin4 | -0.374 | -0.097 |
| Ethambutol3 | 0.822 | 1.936 |
| Meropenem3 | 0.633 | 1.325 |
| Vancomycin16 | -0.31 | -0.233 |
| Rv2680_day32 | -2.282 | -0.169 |
| H37Rv_KO_MarP | 0.24 | 0.711 |
| hypoxia_3wks | -2.999 | -1.782 |
| hypoxia_6wks | -2.714 | -1.255 |
| glycerol | -0.66 | 1.934 |
| cholesterol | 2.591 | 1.239 |
| AJ | -1.44 | -0.435 |
| Bibs02 | -0.309 | 0.026 |
| Bibs02c | -0.64 | -0.741 |
| BL6 | -2.144 | -0.521 |
| BL6a | -2.04 | -0.934 |
| BXD01 | -2.037 | -1.145 |
| BXD010 | -1.759 | 0.009 |
| BXD011 | -2.084 | -0.869 |
| BXD03 | -1.284 | -0.079 |
| BXD04 | -1.934 | -0.95 |
| BXD05 | -1.929 | -1.205 |
| BXD06 | -1.914 | -0.839 |
| BXD07 | -1.315 | -1.127 |
| BXD08 | -1.827 | -0.854 |
| BXD09 | -2.409 | -1.235 |
| CAST | -1.779 | -0.574 |
| CCcont | -0.729 | 0.411 |
| DS01 | -0.772 | 0.21 |
| DS02 | -0.758 | 0.67 |
| DS04 | -0.593 | -1.026 |
| DS0c | -0.069 | -0.195 |
| GP01 | -1.865 | -1.126 |
| GP02 | -1.654 | -0.185 |
| GP0c | -2.455 | -0.461 |
| NOD | -1.886 | -1.033 |
| NZO | -2.419 | -0.629 |
| PWK | -1.391 | -0.561 |
| H37Rv_KO_CtpC | 0.872 | -0.184 |
| H37Rv_KO_CtpD | -0.683 | 0.728 |
| H37Rv_KO_Rv1272 | -1.513 | -0.486 |
| H37Rv_KO_SugABC | -1.251 | 0.738 |
| H37Rv_KO_MbtN | -1.062 | 0.267 |
| Trans05 | -1.721 | 0.256 |
| macrophage_unactivated | -0.12 | -0.155 |
| IL1 | -1.967 | -0.919 |
| Rapamycin | -0.761 | -0.23 |
| Tcell | 0.358 | 0.039 |
| GMCSF | -0.776 | 0.095 |
| IFNab | 0.435 | -0.227 |
| IFNg | -1.179 | -1.208 |
| IFNg_GMCSF1 | -1.225 | -1.166 |
| Rv1432_day32 | -0.787 | -0.347 |
| Rv1565c_day32 | 3.074 | 0.687 |
| secA2_input | 0.023 | -0.855 |
| delta_Rv3594 | 2.232 | -0.439 |
| delta_Rv3717 | 0.81 | -0.49 |
| delta_Rv3811 | 0.779 | -0.782 |
| delta_Rv0954 | 4.017 | 1.698 |
| PonA1 | 1.101 | 1.34 |
| EccD1_KO | 1.151 | 0.181 |
| EspI_KO | 2.321 | 0.342 |
| PE35_KO | 1.473 | 0.548 |
| PPE68_KO | 2.342 | 0.547 |
| glycerol2 | -0.43 | 0.258 |
| lignocerate | 0.675 | 0.371 |
| oleate | -0.603 | 0.099 |
| phosphatidylcholine | -0.043 | 0.126 |
| acetate | 0.025 | 0.321 |
| glucAc | 0.122 | 0.416 |
| Rv0950ko | -0.045 | 0.865 |
| Rv1096ko | 0.353 | 0.639 |
| Rv3684ko | 1.484 | -0.046 |
| delta_otsA_trehalose | 1.312 | 0.374 |