Top 10 genes with highest correlation to Rv1287/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2467/pepN | (cc=0.7005) | info on Rv2467/pepN |
| Rv0561c/- | (cc=0.6926) | info on Rv0561c/- |
| Rv1323/fadA4 | (cc=0.6389) | info on Rv1323/fadA4 |
| Rv2563/- | (cc=0.634) | info on Rv2563/- |
| Rv0910/- | (cc=0.6298) | info on Rv0910/- |
| Rv0406c/- | (cc=0.628) | info on Rv0406c/- |
| Rv0634A/- | (cc=0.6274) | info on Rv0634A/- |
| Rv2258c/- | (cc=0.6125) | info on Rv2258c/- |
| Rv3041c/- | (cc=0.6091) | info on Rv3041c/- |
| Rv1473/- | (cc=0.6039) | info on Rv1473/- |
Correlation of Rv1287/- with Rv1473/-
Normalized LFCs for Rv1287/-:
(description and provenance of datasets)
| Rv1287/- | Rv1473/- | |
| Fe_supp_jason_reseq | 2.9 | 1.664 |
| low_pH_jason_reseq | 0.323 | 0.179 |
| NO_jason_reseq | -0.583 | 0.281 |
| B6_jason_reseq | 0.571 | -0.421 |
| MHCII_jason_reseq | 0.098 | 1.03 |
| Isoniazid02 | 0.805 | -0.141 |
| Rifampicin4 | -0.374 | 0.141 |
| Ethambutol3 | 0.822 | 0.353 |
| Meropenem3 | 0.633 | 0.545 |
| Vancomycin16 | -0.31 | 0.403 |
| Rv2680_day32 | -2.282 | 1.437 |
| H37Rv_KO_MarP | 0.24 | -0.313 |
| hypoxia_3wks | -2.999 | -1.132 |
| hypoxia_6wks | -2.714 | -2.088 |
| glycerol | -0.66 | 2.61 |
| cholesterol | 2.591 | 0.871 |
| AJ | -1.44 | -1.55 |
| Bibs02 | -0.309 | -0.167 |
| Bibs02c | -0.64 | 0.674 |
| BL6 | -2.144 | -1.06 |
| BL6a | -2.04 | 0.057 |
| BXD01 | -2.037 | -1.386 |
| BXD010 | -1.759 | -1.363 |
| BXD011 | -2.084 | -1.165 |
| BXD03 | -1.284 | -1.553 |
| BXD04 | -1.934 | -1.316 |
| BXD05 | -1.929 | -1.055 |
| BXD06 | -1.914 | -1.221 |
| BXD07 | -1.315 | -1.174 |
| BXD08 | -1.827 | -1.527 |
| BXD09 | -2.409 | -1.286 |
| CAST | -1.779 | -1.952 |
| CCcont | -0.729 | 1.227 |
| DS01 | -0.772 | -0.14 |
| DS02 | -0.758 | -1.226 |
| DS04 | -0.593 | -1.192 |
| DS0c | -0.069 | -0.064 |
| GP01 | -1.865 | 0.811 |
| GP02 | -1.654 | -0.603 |
| GP0c | -2.455 | -0.391 |
| NOD | -1.886 | -1.38 |
| NZO | -2.419 | -1.825 |
| PWK | -1.391 | -2.087 |
| H37Rv_KO_CtpC | 0.872 | -0.835 |
| H37Rv_KO_CtpD | -0.683 | 0.173 |
| H37Rv_KO_Rv1272 | -1.513 | -0.942 |
| H37Rv_KO_SugABC | -1.251 | 1.128 |
| H37Rv_KO_MbtN | -1.062 | 0.086 |
| Trans05 | -1.721 | -0.803 |
| macrophage_unactivated | -0.12 | 0.802 |
| IL1 | -1.967 | -1.344 |
| Rapamycin | -0.761 | -0.175 |
| Tcell | 0.358 | -1.004 |
| GMCSF | -0.776 | -0.15 |
| IFNab | 0.435 | -0.348 |
| IFNg | -1.179 | -1.638 |
| IFNg_GMCSF1 | -1.225 | -0.757 |
| Rv1432_day32 | -0.787 | 0.992 |
| Rv1565c_day32 | 3.074 | 1.515 |
| secA2_input | 0.023 | 1.623 |
| delta_Rv3594 | 2.232 | 2.688 |
| delta_Rv3717 | 0.81 | 0.82 |
| delta_Rv3811 | 0.779 | 2.104 |
| delta_Rv0954 | 4.017 | 1.005 |
| PonA1 | 1.101 | 1.445 |
| EccD1_KO | 1.151 | 0.539 |
| EspI_KO | 2.321 | 1.474 |
| PE35_KO | 1.473 | 1.193 |
| PPE68_KO | 2.342 | 1.6 |
| glycerol2 | -0.43 | -0.615 |
| lignocerate | 0.675 | -0.785 |
| oleate | -0.603 | -1.195 |
| phosphatidylcholine | -0.043 | -0.803 |
| acetate | 0.025 | 0.527 |
| glucAc | 0.122 | 0.707 |
| Rv0950ko | -0.045 | -0.932 |
| Rv1096ko | 0.353 | -1.559 |
| Rv3684ko | 1.484 | -1.228 |
| delta_otsA_trehalose | 1.312 | 1.844 |