Top 10 genes with highest correlation to Rv1287/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2467/pepN | (cc=0.7005) | info on Rv2467/pepN |
| Rv0561c/- | (cc=0.6926) | info on Rv0561c/- |
| Rv1323/fadA4 | (cc=0.6389) | info on Rv1323/fadA4 |
| Rv2563/- | (cc=0.634) | info on Rv2563/- |
| Rv0910/- | (cc=0.6298) | info on Rv0910/- |
| Rv0406c/- | (cc=0.628) | info on Rv0406c/- |
| Rv0634A/- | (cc=0.6274) | info on Rv0634A/- |
| Rv2258c/- | (cc=0.6125) | info on Rv2258c/- |
| Rv3041c/- | (cc=0.6091) | info on Rv3041c/- |
| Rv1473/- | (cc=0.6039) | info on Rv1473/- |
Correlation of Rv1287/- with Rv1323/fadA4
Normalized LFCs for Rv1287/-:
(description and provenance of datasets)
| Rv1287/- | Rv1323/fadA4 | |
| Fe_supp_jason_reseq | 2.9 | -0.66 |
| low_pH_jason_reseq | 0.323 | 0.457 |
| NO_jason_reseq | -0.583 | -1.097 |
| B6_jason_reseq | 0.571 | -0.71 |
| MHCII_jason_reseq | 0.098 | 0.604 |
| Isoniazid02 | 0.805 | 1.058 |
| Rifampicin4 | -0.374 | 0.425 |
| Ethambutol3 | 0.822 | 1.045 |
| Meropenem3 | 0.633 | 1.236 |
| Vancomycin16 | -0.31 | 0.982 |
| Rv2680_day32 | -2.282 | -0.734 |
| H37Rv_KO_MarP | 0.24 | 0.885 |
| hypoxia_3wks | -2.999 | -0.502 |
| hypoxia_6wks | -2.714 | -1.462 |
| glycerol | -0.66 | -0.047 |
| cholesterol | 2.591 | 0.055 |
| AJ | -1.44 | -0.376 |
| Bibs02 | -0.309 | -0.121 |
| Bibs02c | -0.64 | -0.02 |
| BL6 | -2.144 | -2.727 |
| BL6a | -2.04 | -1.342 |
| BXD01 | -2.037 | -2.864 |
| BXD010 | -1.759 | -2.137 |
| BXD011 | -2.084 | -3.063 |
| BXD03 | -1.284 | -2.196 |
| BXD04 | -1.934 | -2.652 |
| BXD05 | -1.929 | -2.511 |
| BXD06 | -1.914 | -2.77 |
| BXD07 | -1.315 | -2.721 |
| BXD08 | -1.827 | -3.027 |
| BXD09 | -2.409 | -2.917 |
| CAST | -1.779 | -0.868 |
| CCcont | -0.729 | -1.199 |
| DS01 | -0.772 | -0.592 |
| DS02 | -0.758 | -0.121 |
| DS04 | -0.593 | -1.566 |
| DS0c | -0.069 | -0.596 |
| GP01 | -1.865 | -1.94 |
| GP02 | -1.654 | -2.603 |
| GP0c | -2.455 | -3.04 |
| NOD | -1.886 | 0.628 |
| NZO | -2.419 | -1.753 |
| PWK | -1.391 | -0.521 |
| H37Rv_KO_CtpC | 0.872 | 0.172 |
| H37Rv_KO_CtpD | -0.683 | -0.962 |
| H37Rv_KO_Rv1272 | -1.513 | -2.119 |
| H37Rv_KO_SugABC | -1.251 | -0.711 |
| H37Rv_KO_MbtN | -1.062 | -1.156 |
| Trans05 | -1.721 | -1.482 |
| macrophage_unactivated | -0.12 | -1.496 |
| IL1 | -1.967 | -1.062 |
| Rapamycin | -0.761 | -1.495 |
| Tcell | 0.358 | -0.746 |
| GMCSF | -0.776 | -1.545 |
| IFNab | 0.435 | -1.433 |
| IFNg | -1.179 | -1.721 |
| IFNg_GMCSF1 | -1.225 | -0.377 |
| Rv1432_day32 | -0.787 | -0.724 |
| Rv1565c_day32 | 3.074 | 0.697 |
| secA2_input | 0.023 | 0.473 |
| delta_Rv3594 | 2.232 | 0.34 |
| delta_Rv3717 | 0.81 | -0.313 |
| delta_Rv3811 | 0.779 | 0.034 |
| delta_Rv0954 | 4.017 | 0.643 |
| PonA1 | 1.101 | 0.291 |
| EccD1_KO | 1.151 | 0.421 |
| EspI_KO | 2.321 | -0.051 |
| PE35_KO | 1.473 | 0.251 |
| PPE68_KO | 2.342 | 0.275 |
| glycerol2 | -0.43 | 0.586 |
| lignocerate | 0.675 | 1.196 |
| oleate | -0.603 | 0.303 |
| phosphatidylcholine | -0.043 | 0.847 |
| acetate | 0.025 | 0.74 |
| glucAc | 0.122 | 0.642 |
| Rv0950ko | -0.045 | 0.431 |
| Rv1096ko | 0.353 | 0.676 |
| Rv3684ko | 1.484 | 0.056 |
| delta_otsA_trehalose | 1.312 | -1.023 |