Top 10 genes with highest correlation to Rv1287/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2467/pepN | (cc=0.7005) | info on Rv2467/pepN |
| Rv0561c/- | (cc=0.6926) | info on Rv0561c/- |
| Rv1323/fadA4 | (cc=0.6389) | info on Rv1323/fadA4 |
| Rv2563/- | (cc=0.634) | info on Rv2563/- |
| Rv0910/- | (cc=0.6298) | info on Rv0910/- |
| Rv0406c/- | (cc=0.628) | info on Rv0406c/- |
| Rv0634A/- | (cc=0.6274) | info on Rv0634A/- |
| Rv2258c/- | (cc=0.6125) | info on Rv2258c/- |
| Rv3041c/- | (cc=0.6091) | info on Rv3041c/- |
| Rv1473/- | (cc=0.6039) | info on Rv1473/- |
Correlation of Rv1287/- with Rv2467/pepN
Normalized LFCs for Rv1287/-:
(description and provenance of datasets)
| Rv1287/- | Rv2467/pepN | |
| Fe_supp_jason_reseq | 2.9 | 3.498 |
| low_pH_jason_reseq | 0.323 | 0.831 |
| NO_jason_reseq | -0.583 | -1.016 |
| B6_jason_reseq | 0.571 | -0.311 |
| MHCII_jason_reseq | 0.098 | 1.018 |
| Isoniazid02 | 0.805 | -0.077 |
| Rifampicin4 | -0.374 | -0.915 |
| Ethambutol3 | 0.822 | 0.18 |
| Meropenem3 | 0.633 | 0.049 |
| Vancomycin16 | -0.31 | -0.17 |
| Rv2680_day32 | -2.282 | -0.75 |
| H37Rv_KO_MarP | 0.24 | 0.388 |
| hypoxia_3wks | -2.999 | -1.017 |
| hypoxia_6wks | -2.714 | -1.432 |
| glycerol | -0.66 | 1.006 |
| cholesterol | 2.591 | 1.421 |
| AJ | -1.44 | -0.482 |
| Bibs02 | -0.309 | -0.55 |
| Bibs02c | -0.64 | 0.674 |
| BL6 | -2.144 | -1.549 |
| BL6a | -2.04 | 0.218 |
| BXD01 | -2.037 | -1.286 |
| BXD010 | -1.759 | -1.363 |
| BXD011 | -2.084 | -0.886 |
| BXD03 | -1.284 | -0.487 |
| BXD04 | -1.934 | -0.896 |
| BXD05 | -1.929 | -1.38 |
| BXD06 | -1.914 | -1.368 |
| BXD07 | -1.315 | -0.888 |
| BXD08 | -1.827 | -0.622 |
| BXD09 | -2.409 | -1.614 |
| CAST | -1.779 | -1.602 |
| CCcont | -0.729 | 0.399 |
| DS01 | -0.772 | -1.389 |
| DS02 | -0.758 | -1.843 |
| DS04 | -0.593 | -1.844 |
| DS0c | -0.069 | -0.781 |
| GP01 | -1.865 | -0.278 |
| GP02 | -1.654 | -0.063 |
| GP0c | -2.455 | -1.437 |
| NOD | -1.886 | -1.266 |
| NZO | -2.419 | -1.075 |
| PWK | -1.391 | -1.662 |
| H37Rv_KO_CtpC | 0.872 | 0.36 |
| H37Rv_KO_CtpD | -0.683 | -0.309 |
| H37Rv_KO_Rv1272 | -1.513 | 0.0 |
| H37Rv_KO_SugABC | -1.251 | -0.206 |
| H37Rv_KO_MbtN | -1.062 | -0.015 |
| Trans05 | -1.721 | -1.558 |
| macrophage_unactivated | -0.12 | 0.511 |
| IL1 | -1.967 | 0.481 |
| Rapamycin | -0.761 | 0.307 |
| Tcell | 0.358 | 0.821 |
| GMCSF | -0.776 | -0.38 |
| IFNab | 0.435 | -0.671 |
| IFNg | -1.179 | 0.179 |
| IFNg_GMCSF1 | -1.225 | 0.0 |
| Rv1432_day32 | -0.787 | 0.687 |
| Rv1565c_day32 | 3.074 | 0.261 |
| secA2_input | 0.023 | 0.573 |
| delta_Rv3594 | 2.232 | 2.216 |
| delta_Rv3717 | 0.81 | 0.784 |
| delta_Rv3811 | 0.779 | 1.785 |
| delta_Rv0954 | 4.017 | 0.364 |
| PonA1 | 1.101 | 0.044 |
| EccD1_KO | 1.151 | 0.99 |
| EspI_KO | 2.321 | 1.095 |
| PE35_KO | 1.473 | 1.286 |
| PPE68_KO | 2.342 | 1.725 |
| glycerol2 | -0.43 | -0.178 |
| lignocerate | 0.675 | -0.564 |
| oleate | -0.603 | -1.598 |
| phosphatidylcholine | -0.043 | -0.241 |
| acetate | 0.025 | 0.46 |
| glucAc | 0.122 | 0.295 |
| Rv0950ko | -0.045 | 0.103 |
| Rv1096ko | 0.353 | 0.202 |
| Rv3684ko | 1.484 | 1.159 |
| delta_otsA_trehalose | 1.312 | 0.437 |