Top 10 genes with highest correlation to Rv1130/prpD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1129c/- | (cc=0.7283) | info on Rv1129c/- |
| Rv3553/- | (cc=0.6381) | info on Rv3553/- |
| Rv3615c/espC | (cc=0.6) | info on Rv3615c/espC |
| Rv1131/prpC | (cc=0.5866) | info on Rv1131/prpC |
| Rv3551/- | (cc=0.5822) | info on Rv3551/- |
| Rv3545c/cyp125 | (cc=0.5798) | info on Rv3545c/cyp125 |
| Rv0172/mce1D | (cc=0.5729) | info on Rv0172/mce1D |
| Rv3552/- | (cc=0.5701) | info on Rv3552/- |
| Rv3540c/ltp2 | (cc=0.5684) | info on Rv3540c/ltp2 |
| Rv3614c/espD | (cc=0.5675) | info on Rv3614c/espD |
Correlation of Rv1130/prpD with Rv3615c/espC
Normalized LFCs for Rv1130/prpD:
(description and provenance of datasets)
| Rv1130/prpD | Rv3615c/espC | |
| Fe_supp_jason_reseq | -0.554 | -0.076 |
| low_pH_jason_reseq | -2.367 | -0.791 |
| NO_jason_reseq | 0.042 | -0.179 |
| B6_jason_reseq | -2.148 | -2.738 |
| MHCII_jason_reseq | -1.471 | -3.219 |
| Isoniazid02 | 0.147 | -1.534 |
| Rifampicin4 | -0.219 | 0.663 |
| Ethambutol3 | 0.181 | 0.61 |
| Meropenem3 | 0.732 | -0.927 |
| Vancomycin16 | 0.138 | -0.438 |
| Rv2680_day32 | -1.446 | -2.287 |
| H37Rv_KO_MarP | -0.302 | 0.763 |
| hypoxia_3wks | -0.686 | -0.642 |
| hypoxia_6wks | 0.259 | -0.453 |
| glycerol | -0.671 | -1.542 |
| cholesterol | -3.292 | -2.127 |
| AJ | -1.852 | -4.615 |
| Bibs02 | -3.513 | -6.0 |
| Bibs02c | -3.471 | -5.515 |
| BL6 | 0.876 | -1.925 |
| BL6a | -1.171 | -4.038 |
| BXD01 | 0.075 | -2.432 |
| BXD010 | 0.237 | -1.317 |
| BXD011 | 0.272 | -2.379 |
| BXD03 | -0.17 | -2.734 |
| BXD04 | -0.06 | -1.094 |
| BXD05 | -0.207 | -2.385 |
| BXD06 | 0.106 | -3.264 |
| BXD07 | 0.2 | -2.435 |
| BXD08 | 0.646 | -3.429 |
| BXD09 | -0.051 | -3.21 |
| CAST | -1.562 | -4.656 |
| CCcont | 0.873 | 0.08 |
| DS01 | -3.537 | -5.297 |
| DS02 | -3.608 | -6.0 |
| DS04 | -1.452 | -3.797 |
| DS0c | -2.596 | -6.0 |
| GP01 | -1.529 | -1.918 |
| GP02 | -0.583 | -2.771 |
| GP0c | -0.096 | -0.687 |
| NOD | -0.054 | -0.556 |
| NZO | -1.982 | -4.599 |
| PWK | -2.011 | -5.419 |
| H37Rv_KO_CtpC | -0.798 | -1.589 |
| H37Rv_KO_CtpD | -0.381 | -0.43 |
| H37Rv_KO_Rv1272 | 0.62 | -1.432 |
| H37Rv_KO_SugABC | -0.024 | -1.494 |
| H37Rv_KO_MbtN | -0.413 | 0.721 |
| Trans05 | 0.241 | -1.485 |
| macrophage_unactivated | -0.997 | -1.203 |
| IL1 | -3.625 | -0.303 |
| Rapamycin | -3.228 | -0.761 |
| Tcell | -2.209 | -2.278 |
| GMCSF | 0.739 | 0.887 |
| IFNab | 1.608 | 0.629 |
| IFNg | -0.139 | -1.924 |
| IFNg_GMCSF1 | 1.012 | -1.304 |
| Rv1432_day32 | -0.19 | -2.181 |
| Rv1565c_day32 | -0.261 | -3.023 |
| secA2_input | -1.005 | 0.844 |
| delta_Rv3594 | 0.347 | 0.45 |
| delta_Rv3717 | 0.428 | -0.276 |
| delta_Rv3811 | 0.47 | -0.611 |
| delta_Rv0954 | 0.884 | 0.062 |
| PonA1 | 0.152 | -1.032 |
| EccD1_KO | 1.145 | -0.247 |
| EspI_KO | 0.359 | -0.639 |
| PE35_KO | 0.971 | -0.096 |
| PPE68_KO | 0.921 | -0.403 |
| glycerol2 | -0.363 | 0.556 |
| lignocerate | -0.514 | 0.544 |
| oleate | -1.27 | -0.103 |
| phosphatidylcholine | -0.717 | -0.066 |
| acetate | 1.232 | -0.146 |
| glucAc | 1.099 | -0.122 |
| Rv0950ko | 0.476 | -0.256 |
| Rv1096ko | 0.265 | -1.122 |
| Rv3684ko | -0.203 | -0.668 |
| delta_otsA_trehalose | 0.846 | 1.448 |