Top 10 genes with highest correlation to Rv1130/prpD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1129c/- | (cc=0.7283) | info on Rv1129c/- |
| Rv3553/- | (cc=0.6381) | info on Rv3553/- |
| Rv3615c/espC | (cc=0.6) | info on Rv3615c/espC |
| Rv1131/prpC | (cc=0.5866) | info on Rv1131/prpC |
| Rv3551/- | (cc=0.5822) | info on Rv3551/- |
| Rv3545c/cyp125 | (cc=0.5798) | info on Rv3545c/cyp125 |
| Rv0172/mce1D | (cc=0.5729) | info on Rv0172/mce1D |
| Rv3552/- | (cc=0.5701) | info on Rv3552/- |
| Rv3540c/ltp2 | (cc=0.5684) | info on Rv3540c/ltp2 |
| Rv3614c/espD | (cc=0.5675) | info on Rv3614c/espD |
Correlation of Rv1130/prpD with Rv0172/mce1D
Normalized LFCs for Rv1130/prpD:
(description and provenance of datasets)
| Rv1130/prpD | Rv0172/mce1D | |
| Fe_supp_jason_reseq | -0.554 | 0.494 |
| low_pH_jason_reseq | -2.367 | 0.942 |
| NO_jason_reseq | 0.042 | 2.326 |
| B6_jason_reseq | -2.148 | 0.236 |
| MHCII_jason_reseq | -1.471 | -0.915 |
| Isoniazid02 | 0.147 | -1.544 |
| Rifampicin4 | -0.219 | 1.638 |
| Ethambutol3 | 0.181 | 0.285 |
| Meropenem3 | 0.732 | 1.174 |
| Vancomycin16 | 0.138 | 1.125 |
| Rv2680_day32 | -1.446 | 0.036 |
| H37Rv_KO_MarP | -0.302 | 0.494 |
| hypoxia_3wks | -0.686 | 1.786 |
| hypoxia_6wks | 0.259 | 1.625 |
| glycerol | -0.671 | -0.856 |
| cholesterol | -3.292 | 0.313 |
| AJ | -1.852 | -0.134 |
| Bibs02 | -3.513 | -2.327 |
| Bibs02c | -3.471 | -2.543 |
| BL6 | 0.876 | 0.729 |
| BL6a | -1.171 | -0.946 |
| BXD01 | 0.075 | 0.643 |
| BXD010 | 0.237 | 0.201 |
| BXD011 | 0.272 | 0.468 |
| BXD03 | -0.17 | 0.722 |
| BXD04 | -0.06 | 0.686 |
| BXD05 | -0.207 | 0.515 |
| BXD06 | 0.106 | -0.318 |
| BXD07 | 0.2 | 0.764 |
| BXD08 | 0.646 | 0.006 |
| BXD09 | -0.051 | 0.98 |
| CAST | -1.562 | -1.18 |
| CCcont | 0.873 | 0.201 |
| DS01 | -3.537 | -3.042 |
| DS02 | -3.608 | -2.614 |
| DS04 | -1.452 | -0.652 |
| DS0c | -2.596 | -2.49 |
| GP01 | -1.529 | -1.38 |
| GP02 | -0.583 | -1.297 |
| GP0c | -0.096 | -0.704 |
| NOD | -0.054 | -0.314 |
| NZO | -1.982 | 0.996 |
| PWK | -2.011 | -1.404 |
| H37Rv_KO_CtpC | -0.798 | -0.765 |
| H37Rv_KO_CtpD | -0.381 | -0.05 |
| H37Rv_KO_Rv1272 | 0.62 | -0.018 |
| H37Rv_KO_SugABC | -0.024 | 0.329 |
| H37Rv_KO_MbtN | -0.413 | -0.281 |
| Trans05 | 0.241 | 0.011 |
| macrophage_unactivated | -0.997 | -0.193 |
| IL1 | -3.625 | -1.714 |
| Rapamycin | -3.228 | -1.596 |
| Tcell | -2.209 | -1.603 |
| GMCSF | 0.739 | 0.187 |
| IFNab | 1.608 | 0.366 |
| IFNg | -0.139 | 0.323 |
| IFNg_GMCSF1 | 1.012 | -0.324 |
| Rv1432_day32 | -0.19 | 0.162 |
| Rv1565c_day32 | -0.261 | -1.813 |
| secA2_input | -1.005 | -0.18 |
| delta_Rv3594 | 0.347 | 0.177 |
| delta_Rv3717 | 0.428 | 0.364 |
| delta_Rv3811 | 0.47 | -0.245 |
| delta_Rv0954 | 0.884 | 0.191 |
| PonA1 | 0.152 | 0.201 |
| EccD1_KO | 1.145 | 0.155 |
| EspI_KO | 0.359 | -0.302 |
| PE35_KO | 0.971 | -0.018 |
| PPE68_KO | 0.921 | 0.0 |
| glycerol2 | -0.363 | 0.121 |
| lignocerate | -0.514 | -2.221 |
| oleate | -1.27 | 0.855 |
| phosphatidylcholine | -0.717 | -0.546 |
| acetate | 1.232 | 0.904 |
| glucAc | 1.099 | 0.288 |
| Rv0950ko | 0.476 | 0.112 |
| Rv1096ko | 0.265 | -0.57 |
| Rv3684ko | -0.203 | 0.747 |
| delta_otsA_trehalose | 0.846 | -0.065 |