Top 10 genes with highest correlation to Rv0945/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2237/- | (cc=0.684) | info on Rv2237/- |
| Rv0698/- | (cc=0.5902) | info on Rv0698/- |
| Rv2219/- | (cc=0.58) | info on Rv2219/- |
| Rv2802c/- | (cc=0.577) | info on Rv2802c/- |
| Rv3287c/rsbW | (cc=0.559) | info on Rv3287c/rsbW |
| Rv0042c/- | (cc=0.555) | info on Rv0042c/- |
| Rv0590A/- | (cc=0.548) | info on Rv0590A/- |
| Rv0789c/- | (cc=0.5442) | info on Rv0789c/- |
| Rv1987/- | (cc=0.5434) | info on Rv1987/- |
| Rv3213c/- | (cc=0.5411) | info on Rv3213c/- |
Correlation of Rv0945/- with Rv2219/-
Normalized LFCs for Rv0945/-:
(description and provenance of datasets)
| Rv0945/- | Rv2219/- | |
| Fe_supp_jason_reseq | -1.432 | -0.137 |
| low_pH_jason_reseq | 0.216 | -1.282 |
| NO_jason_reseq | -1.769 | -0.228 |
| B6_jason_reseq | -2.038 | -0.097 |
| MHCII_jason_reseq | -0.851 | 0.229 |
| Isoniazid02 | -0.141 | 0.162 |
| Rifampicin4 | -0.449 | -0.682 |
| Ethambutol3 | -0.479 | -0.146 |
| Meropenem3 | -0.285 | -0.474 |
| Vancomycin16 | 0.318 | -0.669 |
| Rv2680_day32 | 0.896 | -1.75 |
| H37Rv_KO_MarP | 0.265 | 0.404 |
| hypoxia_3wks | -2.333 | -1.655 |
| hypoxia_6wks | -1.979 | -1.625 |
| glycerol | 2.127 | 0.313 |
| cholesterol | -0.647 | -0.676 |
| AJ | -0.881 | 0.096 |
| Bibs02 | -1.592 | 1.766 |
| Bibs02c | -1.085 | -1.605 |
| BL6 | 0.723 | 1.144 |
| BL6a | -0.626 | -1.058 |
| BXD01 | 1.029 | 0.534 |
| BXD010 | -0.486 | -0.684 |
| BXD011 | -0.569 | -0.977 |
| BXD03 | -0.92 | -0.388 |
| BXD04 | 0.426 | -0.845 |
| BXD05 | -0.602 | 0.347 |
| BXD06 | 0.059 | -0.623 |
| BXD07 | -0.064 | 0.883 |
| BXD08 | 1.986 | 0.467 |
| BXD09 | -0.36 | -0.122 |
| CAST | -1.373 | -0.307 |
| CCcont | 2.31 | 1.891 |
| DS01 | 0.205 | -0.678 |
| DS02 | 0.364 | 1.068 |
| DS04 | -0.613 | 0.953 |
| DS0c | -1.672 | -1.158 |
| GP01 | 1.651 | 0.986 |
| GP02 | -0.213 | -0.388 |
| GP0c | 0.718 | 0.248 |
| NOD | -1.339 | -0.905 |
| NZO | -1.357 | -1.065 |
| PWK | -1.169 | -1.189 |
| H37Rv_KO_CtpC | 2.408 | -0.558 |
| H37Rv_KO_CtpD | -0.976 | 2.726 |
| H37Rv_KO_Rv1272 | 0.778 | -0.753 |
| H37Rv_KO_SugABC | -0.376 | -0.677 |
| H37Rv_KO_MbtN | -0.614 | -0.296 |
| Trans05 | 0.611 | -1.121 |
| macrophage_unactivated | 2.326 | 0.234 |
| IL1 | -0.78 | -2.337 |
| Rapamycin | -0.807 | -2.418 |
| Tcell | 2.63 | 1.098 |
| GMCSF | -0.694 | -2.445 |
| IFNab | 0.0 | -2.382 |
| IFNg | -0.703 | -2.475 |
| IFNg_GMCSF1 | 1.012 | -2.476 |
| Rv1432_day32 | 0.0 | -0.18 |
| Rv1565c_day32 | 0.0 | -0.706 |
| secA2_input | -0.247 | 0.0 |
| delta_Rv3594 | 0.369 | 2.213 |
| delta_Rv3717 | -0.174 | 1.562 |
| delta_Rv3811 | 0.805 | 1.487 |
| delta_Rv0954 | 1.455 | 0.311 |
| PonA1 | 0.212 | -0.159 |
| EccD1_KO | 0.25 | 0.697 |
| EspI_KO | 1.777 | 0.605 |
| PE35_KO | 0.0 | 1.779 |
| PPE68_KO | 0.586 | 1.789 |
| glycerol2 | 3.113 | 3.845 |
| lignocerate | 3.78 | 3.444 |
| oleate | -0.829 | 0.0 |
| phosphatidylcholine | 2.899 | 3.37 |
| acetate | 4.666 | 3.661 |
| glucAc | 3.978 | 3.26 |
| Rv0950ko | -0.09 | -2.433 |
| Rv1096ko | 0.0 | -2.021 |
| Rv3684ko | -0.96 | -0.573 |
| delta_otsA_trehalose | 0.0 | 0.321 |