Top 10 genes with highest correlation to Rv0945/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2237/- | (cc=0.684) | info on Rv2237/- |
| Rv0698/- | (cc=0.5902) | info on Rv0698/- |
| Rv2219/- | (cc=0.58) | info on Rv2219/- |
| Rv2802c/- | (cc=0.577) | info on Rv2802c/- |
| Rv3287c/rsbW | (cc=0.559) | info on Rv3287c/rsbW |
| Rv0042c/- | (cc=0.555) | info on Rv0042c/- |
| Rv0590A/- | (cc=0.548) | info on Rv0590A/- |
| Rv0789c/- | (cc=0.5442) | info on Rv0789c/- |
| Rv1987/- | (cc=0.5434) | info on Rv1987/- |
| Rv3213c/- | (cc=0.5411) | info on Rv3213c/- |
Correlation of Rv0945/- with Rv0042c/-
Normalized LFCs for Rv0945/-:
(description and provenance of datasets)
| Rv0945/- | Rv0042c/- | |
| Fe_supp_jason_reseq | -1.432 | -0.429 |
| low_pH_jason_reseq | 0.216 | 2.832 |
| NO_jason_reseq | -1.769 | -1.168 |
| B6_jason_reseq | -2.038 | -1.443 |
| MHCII_jason_reseq | -0.851 | 0.527 |
| Isoniazid02 | -0.141 | 0.24 |
| Rifampicin4 | -0.449 | -0.915 |
| Ethambutol3 | -0.479 | 1.484 |
| Meropenem3 | -0.285 | -0.53 |
| Vancomycin16 | 0.318 | -1.47 |
| Rv2680_day32 | 0.896 | 0.249 |
| H37Rv_KO_MarP | 0.265 | -1.381 |
| hypoxia_3wks | -2.333 | -2.703 |
| hypoxia_6wks | -1.979 | -2.955 |
| glycerol | 2.127 | 0.231 |
| cholesterol | -0.647 | -0.36 |
| AJ | -0.881 | -0.761 |
| Bibs02 | -1.592 | -0.319 |
| Bibs02c | -1.085 | -0.317 |
| BL6 | 0.723 | 2.042 |
| BL6a | -0.626 | 0.644 |
| BXD01 | 1.029 | 1.487 |
| BXD010 | -0.486 | 1.227 |
| BXD011 | -0.569 | -0.026 |
| BXD03 | -0.92 | 2.173 |
| BXD04 | 0.426 | 1.113 |
| BXD05 | -0.602 | 0.154 |
| BXD06 | 0.059 | 0.511 |
| BXD07 | -0.064 | 0.605 |
| BXD08 | 1.986 | 0.793 |
| BXD09 | -0.36 | 1.114 |
| CAST | -1.373 | 0.179 |
| CCcont | 2.31 | 2.186 |
| DS01 | 0.205 | -0.25 |
| DS02 | 0.364 | -0.54 |
| DS04 | -0.613 | -1.33 |
| DS0c | -1.672 | 1.141 |
| GP01 | 1.651 | 1.385 |
| GP02 | -0.213 | 0.271 |
| GP0c | 0.718 | 2.192 |
| NOD | -1.339 | -0.446 |
| NZO | -1.357 | -0.04 |
| PWK | -1.169 | 0.52 |
| H37Rv_KO_CtpC | 2.408 | 0.95 |
| H37Rv_KO_CtpD | -0.976 | 2.27 |
| H37Rv_KO_Rv1272 | 0.778 | 1.846 |
| H37Rv_KO_SugABC | -0.376 | -1.157 |
| H37Rv_KO_MbtN | -0.614 | 1.155 |
| Trans05 | 0.611 | 1.371 |
| macrophage_unactivated | 2.326 | 0.669 |
| IL1 | -0.78 | 0.05 |
| Rapamycin | -0.807 | -0.638 |
| Tcell | 2.63 | -0.176 |
| GMCSF | -0.694 | -0.549 |
| IFNab | 0.0 | -0.275 |
| IFNg | -0.703 | -1.539 |
| IFNg_GMCSF1 | 1.012 | -0.984 |
| Rv1432_day32 | 0.0 | 4.1 |
| Rv1565c_day32 | 0.0 | -0.415 |
| secA2_input | -0.247 | 0.484 |
| delta_Rv3594 | 0.369 | 2.183 |
| delta_Rv3717 | -0.174 | 2.034 |
| delta_Rv3811 | 0.805 | 1.828 |
| delta_Rv0954 | 1.455 | 0.766 |
| PonA1 | 0.212 | 0.856 |
| EccD1_KO | 0.25 | -0.895 |
| EspI_KO | 1.777 | -2.13 |
| PE35_KO | 0.0 | -0.356 |
| PPE68_KO | 0.586 | 0.403 |
| glycerol2 | 3.113 | 3.869 |
| lignocerate | 3.78 | 3.653 |
| oleate | -0.829 | -1.202 |
| phosphatidylcholine | 2.899 | 3.064 |
| acetate | 4.666 | 3.807 |
| glucAc | 3.978 | 3.201 |
| Rv0950ko | -0.09 | -0.476 |
| Rv1096ko | 0.0 | -2.063 |
| Rv3684ko | -0.96 | -0.252 |
| delta_otsA_trehalose | 0.0 | 0.739 |