Top 10 genes with highest correlation to Rv0945/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2237/- | (cc=0.684) | info on Rv2237/- |
| Rv0698/- | (cc=0.5902) | info on Rv0698/- |
| Rv2219/- | (cc=0.58) | info on Rv2219/- |
| Rv2802c/- | (cc=0.577) | info on Rv2802c/- |
| Rv3287c/rsbW | (cc=0.559) | info on Rv3287c/rsbW |
| Rv0042c/- | (cc=0.555) | info on Rv0042c/- |
| Rv0590A/- | (cc=0.548) | info on Rv0590A/- |
| Rv0789c/- | (cc=0.5442) | info on Rv0789c/- |
| Rv1987/- | (cc=0.5434) | info on Rv1987/- |
| Rv3213c/- | (cc=0.5411) | info on Rv3213c/- |
Correlation of Rv0945/- with Rv0698/-
Normalized LFCs for Rv0945/-:
(description and provenance of datasets)
| Rv0945/- | Rv0698/- | |
| Fe_supp_jason_reseq | -1.432 | -2.327 |
| low_pH_jason_reseq | 0.216 | 0.706 |
| NO_jason_reseq | -1.769 | -0.155 |
| B6_jason_reseq | -2.038 | -2.577 |
| MHCII_jason_reseq | -0.851 | -1.035 |
| Isoniazid02 | -0.141 | -0.113 |
| Rifampicin4 | -0.449 | 0.39 |
| Ethambutol3 | -0.479 | 0.336 |
| Meropenem3 | -0.285 | 0.089 |
| Vancomycin16 | 0.318 | 0.0 |
| Rv2680_day32 | 0.896 | 1.157 |
| H37Rv_KO_MarP | 0.265 | 0.313 |
| hypoxia_3wks | -2.333 | -0.921 |
| hypoxia_6wks | -1.979 | -1.059 |
| glycerol | 2.127 | 0.192 |
| cholesterol | -0.647 | 0.203 |
| AJ | -0.881 | -0.118 |
| Bibs02 | -1.592 | -0.775 |
| Bibs02c | -1.085 | -1.622 |
| BL6 | 0.723 | 1.536 |
| BL6a | -0.626 | -0.207 |
| BXD01 | 1.029 | 0.911 |
| BXD010 | -0.486 | 0.432 |
| BXD011 | -0.569 | 0.233 |
| BXD03 | -0.92 | -0.069 |
| BXD04 | 0.426 | 2.14 |
| BXD05 | -0.602 | 0.835 |
| BXD06 | 0.059 | 0.451 |
| BXD07 | -0.064 | 1.134 |
| BXD08 | 1.986 | 0.541 |
| BXD09 | -0.36 | -0.071 |
| CAST | -1.373 | -0.37 |
| CCcont | 2.31 | 2.126 |
| DS01 | 0.205 | 0.527 |
| DS02 | 0.364 | 0.654 |
| DS04 | -0.613 | 0.354 |
| DS0c | -1.672 | 0.809 |
| GP01 | 1.651 | 0.715 |
| GP02 | -0.213 | -0.292 |
| GP0c | 0.718 | 1.916 |
| NOD | -1.339 | 1.57 |
| NZO | -1.357 | -0.321 |
| PWK | -1.169 | 0.274 |
| H37Rv_KO_CtpC | 2.408 | -0.261 |
| H37Rv_KO_CtpD | -0.976 | 0.949 |
| H37Rv_KO_Rv1272 | 0.778 | 0.315 |
| H37Rv_KO_SugABC | -0.376 | -0.669 |
| H37Rv_KO_MbtN | -0.614 | 0.098 |
| Trans05 | 0.611 | 1.877 |
| macrophage_unactivated | 2.326 | 0.133 |
| IL1 | -0.78 | -0.128 |
| Rapamycin | -0.807 | -0.132 |
| Tcell | 2.63 | 0.521 |
| GMCSF | -0.694 | -1.172 |
| IFNab | 0.0 | 0.248 |
| IFNg | -0.703 | -0.355 |
| IFNg_GMCSF1 | 1.012 | -0.135 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.45 |
| secA2_input | -0.247 | -2.719 |
| delta_Rv3594 | 0.369 | -0.922 |
| delta_Rv3717 | -0.174 | -2.231 |
| delta_Rv3811 | 0.805 | -0.107 |
| delta_Rv0954 | 1.455 | -0.142 |
| PonA1 | 0.212 | -1.196 |
| EccD1_KO | 0.25 | -2.144 |
| EspI_KO | 1.777 | -0.827 |
| PE35_KO | 0.0 | -0.128 |
| PPE68_KO | 0.586 | -0.141 |
| glycerol2 | 3.113 | 2.221 |
| lignocerate | 3.78 | 2.498 |
| oleate | -0.829 | -0.688 |
| phosphatidylcholine | 2.899 | 2.359 |
| acetate | 4.666 | 3.41 |
| glucAc | 3.978 | 2.902 |
| Rv0950ko | -0.09 | -0.256 |
| Rv1096ko | 0.0 | -0.528 |
| Rv3684ko | -0.96 | -0.888 |
| delta_otsA_trehalose | 0.0 | 1.38 |