Top 10 genes with highest correlation to Rv0903c/prrA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0380c/- | (cc=0.5505) | info on Rv0380c/- |
| Rv1129c/- | (cc=0.4786) | info on Rv1129c/- |
| Rv0545c/pitA | (cc=0.4679) | info on Rv0545c/pitA |
| Rv2439c/proB | (cc=0.4565) | info on Rv2439c/proB |
| Rv1193/fadD36 | (cc=0.4434) | info on Rv1193/fadD36 |
| Rv0315/- | (cc=0.4403) | info on Rv0315/- |
| Rv2495c/bkdC | (cc=0.4368) | info on Rv2495c/bkdC |
| Rv1079/metB | (cc=0.4362) | info on Rv1079/metB |
| Rv3387/- | (cc=0.433) | info on Rv3387/- |
| Rv3178/- | (cc=0.4328) | info on Rv3178/- |
Correlation of Rv0903c/prrA with Rv3387/-
Normalized LFCs for Rv0903c/prrA:
(description and provenance of datasets)
| Rv0903c/prrA | Rv3387/- | |
| Fe_supp_jason_reseq | -1.31 | -0.33 |
| low_pH_jason_reseq | -2.807 | -1.016 |
| NO_jason_reseq | -0.643 | -1.289 |
| B6_jason_reseq | -1.11 | -0.719 |
| MHCII_jason_reseq | -1.64 | -1.076 |
| Isoniazid02 | 0.178 | -0.157 |
| Rifampicin4 | 1.346 | 1.427 |
| Ethambutol3 | 0.676 | 0.068 |
| Meropenem3 | 1.173 | -0.093 |
| Vancomycin16 | 2.109 | 0.406 |
| Rv2680_day32 | 0.249 | 0.942 |
| H37Rv_KO_MarP | -0.865 | 0.95 |
| hypoxia_3wks | 0.77 | 0.191 |
| hypoxia_6wks | 0.758 | 0.841 |
| glycerol | 0.0 | -1.107 |
| cholesterol | -0.509 | -0.959 |
| AJ | -0.815 | -0.575 |
| Bibs02 | -0.642 | 0.46 |
| Bibs02c | -0.735 | 0.561 |
| BL6 | -0.439 | 0.111 |
| BL6a | -0.319 | 0.201 |
| BXD01 | -0.328 | -0.334 |
| BXD010 | 0.828 | 0.263 |
| BXD011 | 0.475 | -0.216 |
| BXD03 | 0.356 | -0.588 |
| BXD04 | 2.043 | 0.262 |
| BXD05 | 0.57 | 0.038 |
| BXD06 | 0.863 | -0.039 |
| BXD07 | 0.194 | 0.697 |
| BXD08 | 0.096 | 0.274 |
| BXD09 | 0.285 | -0.01 |
| CAST | 0.0 | 0.824 |
| CCcont | 0.775 | -0.438 |
| DS01 | -0.38 | 0.017 |
| DS02 | -0.35 | -0.786 |
| DS04 | -0.489 | 1.148 |
| DS0c | 0.0 | -0.828 |
| GP01 | -0.249 | -1.014 |
| GP02 | -0.134 | -1.224 |
| GP0c | 0.733 | -0.551 |
| NOD | -0.361 | -0.88 |
| NZO | -0.503 | 0.124 |
| PWK | -0.689 | -0.689 |
| H37Rv_KO_CtpC | 0.427 | 0.565 |
| H37Rv_KO_CtpD | -0.445 | 0.208 |
| H37Rv_KO_Rv1272 | 0.197 | 0.424 |
| H37Rv_KO_SugABC | -0.348 | 1.074 |
| H37Rv_KO_MbtN | -0.362 | 1.528 |
| Trans05 | -0.459 | -0.077 |
| macrophage_unactivated | -0.413 | 0.776 |
| IL1 | 1.412 | 0.863 |
| Rapamycin | 0.543 | -0.193 |
| Tcell | -0.209 | -1.124 |
| GMCSF | -1.151 | -0.383 |
| IFNab | 0.184 | 0.248 |
| IFNg | -0.171 | -1.029 |
| IFNg_GMCSF1 | 1.049 | -0.173 |
| Rv1432_day32 | 0.0 | -0.014 |
| Rv1565c_day32 | 0.0 | 0.362 |
| secA2_input | -0.255 | 0.202 |
| delta_Rv3594 | 2.634 | 0.906 |
| delta_Rv3717 | 0.0 | 0.593 |
| delta_Rv3811 | 0.87 | 1.148 |
| delta_Rv0954 | 1.47 | 0.747 |
| PonA1 | 0.979 | 0.683 |
| EccD1_KO | -1.194 | -0.191 |
| EspI_KO | -0.75 | 0.613 |
| PE35_KO | -0.496 | 0.368 |
| PPE68_KO | -0.691 | -0.269 |
| glycerol2 | -0.766 | -0.647 |
| lignocerate | -0.537 | -0.826 |
| oleate | -0.625 | -0.231 |
| phosphatidylcholine | -0.618 | -1.069 |
| acetate | 0.56 | 0.151 |
| glucAc | -0.957 | -1.242 |
| Rv0950ko | 0.856 | 0.479 |
| Rv1096ko | 1.007 | 0.48 |
| Rv3684ko | 1.411 | 0.544 |
| delta_otsA_trehalose | -0.122 | -0.455 |