Top 10 genes with highest correlation to Rv0903c/prrA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0380c/- | (cc=0.5505) | info on Rv0380c/- |
| Rv1129c/- | (cc=0.4786) | info on Rv1129c/- |
| Rv0545c/pitA | (cc=0.4679) | info on Rv0545c/pitA |
| Rv2439c/proB | (cc=0.4565) | info on Rv2439c/proB |
| Rv1193/fadD36 | (cc=0.4434) | info on Rv1193/fadD36 |
| Rv0315/- | (cc=0.4403) | info on Rv0315/- |
| Rv2495c/bkdC | (cc=0.4368) | info on Rv2495c/bkdC |
| Rv1079/metB | (cc=0.4362) | info on Rv1079/metB |
| Rv3387/- | (cc=0.433) | info on Rv3387/- |
| Rv3178/- | (cc=0.4328) | info on Rv3178/- |
Correlation of Rv0903c/prrA with Rv0545c/pitA
Normalized LFCs for Rv0903c/prrA:
(description and provenance of datasets)
| Rv0903c/prrA | Rv0545c/pitA | |
| Fe_supp_jason_reseq | -1.31 | -1.323 |
| low_pH_jason_reseq | -2.807 | -1.251 |
| NO_jason_reseq | -0.643 | -0.281 |
| B6_jason_reseq | -1.11 | -1.496 |
| MHCII_jason_reseq | -1.64 | -2.253 |
| Isoniazid02 | 0.178 | 0.327 |
| Rifampicin4 | 1.346 | 1.852 |
| Ethambutol3 | 0.676 | 2.309 |
| Meropenem3 | 1.173 | -0.543 |
| Vancomycin16 | 2.109 | 1.51 |
| Rv2680_day32 | 0.249 | 1.535 |
| H37Rv_KO_MarP | -0.865 | -0.409 |
| hypoxia_3wks | 0.77 | 2.536 |
| hypoxia_6wks | 0.758 | 2.297 |
| glycerol | 0.0 | 1.556 |
| cholesterol | -0.509 | 1.387 |
| AJ | -0.815 | -1.913 |
| Bibs02 | -0.642 | -1.24 |
| Bibs02c | -0.735 | -0.988 |
| BL6 | -0.439 | 0.058 |
| BL6a | -0.319 | -0.047 |
| BXD01 | -0.328 | 0.744 |
| BXD010 | 0.828 | 0.502 |
| BXD011 | 0.475 | 0.997 |
| BXD03 | 0.356 | 0.031 |
| BXD04 | 2.043 | 0.968 |
| BXD05 | 0.57 | 1.082 |
| BXD06 | 0.863 | 0.523 |
| BXD07 | 0.194 | 0.953 |
| BXD08 | 0.096 | 0.408 |
| BXD09 | 0.285 | 0.406 |
| CAST | 0.0 | -1.668 |
| CCcont | 0.775 | 1.485 |
| DS01 | -0.38 | -1.116 |
| DS02 | -0.35 | -0.654 |
| DS04 | -0.489 | -0.645 |
| DS0c | 0.0 | -1.904 |
| GP01 | -0.249 | 1.292 |
| GP02 | -0.134 | 0.797 |
| GP0c | 0.733 | 1.451 |
| NOD | -0.361 | -2.232 |
| NZO | -0.503 | -1.982 |
| PWK | -0.689 | -2.347 |
| H37Rv_KO_CtpC | 0.427 | 0.554 |
| H37Rv_KO_CtpD | -0.445 | -0.094 |
| H37Rv_KO_Rv1272 | 0.197 | -0.296 |
| H37Rv_KO_SugABC | -0.348 | 0.466 |
| H37Rv_KO_MbtN | -0.362 | 2.907 |
| Trans05 | -0.459 | 0.228 |
| macrophage_unactivated | -0.413 | 0.167 |
| IL1 | 1.412 | -2.966 |
| Rapamycin | 0.543 | -2.547 |
| Tcell | -0.209 | -1.274 |
| GMCSF | -1.151 | -1.096 |
| IFNab | 0.184 | 0.656 |
| IFNg | -0.171 | -1.515 |
| IFNg_GMCSF1 | 1.049 | -2.316 |
| Rv1432_day32 | 0.0 | 1.248 |
| Rv1565c_day32 | 0.0 | -1.767 |
| secA2_input | -0.255 | 0.235 |
| delta_Rv3594 | 2.634 | 3.341 |
| delta_Rv3717 | 0.0 | 2.665 |
| delta_Rv3811 | 0.87 | 2.822 |
| delta_Rv0954 | 1.47 | 0.811 |
| PonA1 | 0.979 | -1.154 |
| EccD1_KO | -1.194 | -1.697 |
| EspI_KO | -0.75 | -0.094 |
| PE35_KO | -0.496 | -1.835 |
| PPE68_KO | -0.691 | -2.013 |
| glycerol2 | -0.766 | -0.964 |
| lignocerate | -0.537 | -1.28 |
| oleate | -0.625 | -1.49 |
| phosphatidylcholine | -0.618 | -2.053 |
| acetate | 0.56 | 0.831 |
| glucAc | -0.957 | 0.099 |
| Rv0950ko | 0.856 | -0.193 |
| Rv1096ko | 1.007 | 0.32 |
| Rv3684ko | 1.411 | 0.393 |
| delta_otsA_trehalose | -0.122 | -0.671 |