Top 10 genes with highest correlation to Rv0903c/prrA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0380c/- | (cc=0.5505) | info on Rv0380c/- |
| Rv1129c/- | (cc=0.4786) | info on Rv1129c/- |
| Rv0545c/pitA | (cc=0.4679) | info on Rv0545c/pitA |
| Rv2439c/proB | (cc=0.4565) | info on Rv2439c/proB |
| Rv1193/fadD36 | (cc=0.4434) | info on Rv1193/fadD36 |
| Rv0315/- | (cc=0.4403) | info on Rv0315/- |
| Rv2495c/bkdC | (cc=0.4368) | info on Rv2495c/bkdC |
| Rv1079/metB | (cc=0.4362) | info on Rv1079/metB |
| Rv3387/- | (cc=0.433) | info on Rv3387/- |
| Rv3178/- | (cc=0.4328) | info on Rv3178/- |
Correlation of Rv0903c/prrA with Rv0315/-
Normalized LFCs for Rv0903c/prrA:
(description and provenance of datasets)
| Rv0903c/prrA | Rv0315/- | |
| Fe_supp_jason_reseq | -1.31 | 0.336 |
| low_pH_jason_reseq | -2.807 | -0.515 |
| NO_jason_reseq | -0.643 | -1.714 |
| B6_jason_reseq | -1.11 | -0.939 |
| MHCII_jason_reseq | -1.64 | 0.192 |
| Isoniazid02 | 0.178 | 0.578 |
| Rifampicin4 | 1.346 | 1.884 |
| Ethambutol3 | 0.676 | -0.073 |
| Meropenem3 | 1.173 | 0.591 |
| Vancomycin16 | 2.109 | 1.284 |
| Rv2680_day32 | 0.249 | -0.976 |
| H37Rv_KO_MarP | -0.865 | -0.08 |
| hypoxia_3wks | 0.77 | 0.801 |
| hypoxia_6wks | 0.758 | 0.864 |
| glycerol | 0.0 | -0.221 |
| cholesterol | -0.509 | 0.158 |
| AJ | -0.815 | 0.066 |
| Bibs02 | -0.642 | -1.058 |
| Bibs02c | -0.735 | -0.828 |
| BL6 | -0.439 | 0.793 |
| BL6a | -0.319 | -0.517 |
| BXD01 | -0.328 | 0.395 |
| BXD010 | 0.828 | 0.759 |
| BXD011 | 0.475 | 0.242 |
| BXD03 | 0.356 | 0.375 |
| BXD04 | 2.043 | 0.135 |
| BXD05 | 0.57 | 0.222 |
| BXD06 | 0.863 | 0.188 |
| BXD07 | 0.194 | 0.39 |
| BXD08 | 0.096 | 0.912 |
| BXD09 | 0.285 | 0.293 |
| CAST | 0.0 | -1.029 |
| CCcont | 0.775 | 0.965 |
| DS01 | -0.38 | -0.994 |
| DS02 | -0.35 | -0.397 |
| DS04 | -0.489 | -0.884 |
| DS0c | 0.0 | -0.566 |
| GP01 | -0.249 | 0.321 |
| GP02 | -0.134 | -1.084 |
| GP0c | 0.733 | -0.536 |
| NOD | -0.361 | 0.013 |
| NZO | -0.503 | 0.0 |
| PWK | -0.689 | -0.128 |
| H37Rv_KO_CtpC | 0.427 | -0.524 |
| H37Rv_KO_CtpD | -0.445 | -0.075 |
| H37Rv_KO_Rv1272 | 0.197 | 1.556 |
| H37Rv_KO_SugABC | -0.348 | -1.464 |
| H37Rv_KO_MbtN | -0.362 | -0.661 |
| Trans05 | -0.459 | -0.07 |
| macrophage_unactivated | -0.413 | 0.202 |
| IL1 | 1.412 | 0.291 |
| Rapamycin | 0.543 | -0.298 |
| Tcell | -0.209 | -0.169 |
| GMCSF | -1.151 | 0.958 |
| IFNab | 0.184 | 0.339 |
| IFNg | -0.171 | -0.099 |
| IFNg_GMCSF1 | 1.049 | 0.515 |
| Rv1432_day32 | 0.0 | -0.66 |
| Rv1565c_day32 | 0.0 | -0.881 |
| secA2_input | -0.255 | 0.338 |
| delta_Rv3594 | 2.634 | 0.185 |
| delta_Rv3717 | 0.0 | 0.682 |
| delta_Rv3811 | 0.87 | 0.461 |
| delta_Rv0954 | 1.47 | 0.73 |
| PonA1 | 0.979 | 0.35 |
| EccD1_KO | -1.194 | -1.473 |
| EspI_KO | -0.75 | -1.246 |
| PE35_KO | -0.496 | -0.706 |
| PPE68_KO | -0.691 | -1.027 |
| glycerol2 | -0.766 | -0.146 |
| lignocerate | -0.537 | -1.257 |
| oleate | -0.625 | -0.023 |
| phosphatidylcholine | -0.618 | -0.161 |
| acetate | 0.56 | 0.07 |
| glucAc | -0.957 | 0.17 |
| Rv0950ko | 0.856 | 0.482 |
| Rv1096ko | 1.007 | 0.277 |
| Rv3684ko | 1.411 | -0.157 |
| delta_otsA_trehalose | -0.122 | 0.264 |