Top 10 genes with highest correlation to Rv0903c/prrA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0380c/- | (cc=0.5505) | info on Rv0380c/- |
| Rv1129c/- | (cc=0.4786) | info on Rv1129c/- |
| Rv0545c/pitA | (cc=0.4679) | info on Rv0545c/pitA |
| Rv2439c/proB | (cc=0.4565) | info on Rv2439c/proB |
| Rv1193/fadD36 | (cc=0.4434) | info on Rv1193/fadD36 |
| Rv0315/- | (cc=0.4403) | info on Rv0315/- |
| Rv2495c/bkdC | (cc=0.4368) | info on Rv2495c/bkdC |
| Rv1079/metB | (cc=0.4362) | info on Rv1079/metB |
| Rv3387/- | (cc=0.433) | info on Rv3387/- |
| Rv3178/- | (cc=0.4328) | info on Rv3178/- |
Correlation of Rv0903c/prrA with Rv0380c/-
Normalized LFCs for Rv0903c/prrA:
(description and provenance of datasets)
| Rv0903c/prrA | Rv0380c/- | |
| Fe_supp_jason_reseq | -1.31 | -0.688 |
| low_pH_jason_reseq | -2.807 | -0.42 |
| NO_jason_reseq | -0.643 | 0.16 |
| B6_jason_reseq | -1.11 | -0.516 |
| MHCII_jason_reseq | -1.64 | -2.249 |
| Isoniazid02 | 0.178 | -0.534 |
| Rifampicin4 | 1.346 | 0.983 |
| Ethambutol3 | 0.676 | -0.111 |
| Meropenem3 | 1.173 | -0.072 |
| Vancomycin16 | 2.109 | 0.512 |
| Rv2680_day32 | 0.249 | -1.968 |
| H37Rv_KO_MarP | -0.865 | 0.576 |
| hypoxia_3wks | 0.77 | 2.333 |
| hypoxia_6wks | 0.758 | 0.123 |
| glycerol | 0.0 | -1.934 |
| cholesterol | -0.509 | -0.904 |
| AJ | -0.815 | -0.393 |
| Bibs02 | -0.642 | -0.976 |
| Bibs02c | -0.735 | -2.822 |
| BL6 | -0.439 | -0.467 |
| BL6a | -0.319 | -0.106 |
| BXD01 | -0.328 | 0.0 |
| BXD010 | 0.828 | 1.448 |
| BXD011 | 0.475 | 0.495 |
| BXD03 | 0.356 | 1.529 |
| BXD04 | 2.043 | 0.705 |
| BXD05 | 0.57 | 1.603 |
| BXD06 | 0.863 | 0.895 |
| BXD07 | 0.194 | 0.768 |
| BXD08 | 0.096 | 0.674 |
| BXD09 | 0.285 | 0.962 |
| CAST | 0.0 | -0.946 |
| CCcont | 0.775 | 0.379 |
| DS01 | -0.38 | -0.4 |
| DS02 | -0.35 | -1.815 |
| DS04 | -0.489 | -2.129 |
| DS0c | 0.0 | -0.058 |
| GP01 | -0.249 | -0.617 |
| GP02 | -0.134 | -0.744 |
| GP0c | 0.733 | -0.105 |
| NOD | -0.361 | -1.403 |
| NZO | -0.503 | -1.153 |
| PWK | -0.689 | -1.637 |
| H37Rv_KO_CtpC | 0.427 | -0.275 |
| H37Rv_KO_CtpD | -0.445 | -1.39 |
| H37Rv_KO_Rv1272 | 0.197 | -0.526 |
| H37Rv_KO_SugABC | -0.348 | -0.885 |
| H37Rv_KO_MbtN | -0.362 | -1.056 |
| Trans05 | -0.459 | -0.816 |
| macrophage_unactivated | -0.413 | 0.306 |
| IL1 | 1.412 | 2.005 |
| Rapamycin | 0.543 | 0.298 |
| Tcell | -0.209 | 1.153 |
| GMCSF | -1.151 | 1.096 |
| IFNab | 0.184 | 0.671 |
| IFNg | -0.171 | 2.189 |
| IFNg_GMCSF1 | 1.049 | 1.797 |
| Rv1432_day32 | 0.0 | 0.769 |
| Rv1565c_day32 | 0.0 | -1.106 |
| secA2_input | -0.255 | 0.725 |
| delta_Rv3594 | 2.634 | 1.484 |
| delta_Rv3717 | 0.0 | 1.221 |
| delta_Rv3811 | 0.87 | 1.616 |
| delta_Rv0954 | 1.47 | 0.149 |
| PonA1 | 0.979 | 1.898 |
| EccD1_KO | -1.194 | -1.519 |
| EspI_KO | -0.75 | -3.026 |
| PE35_KO | -0.496 | -2.532 |
| PPE68_KO | -0.691 | -2.662 |
| glycerol2 | -0.766 | -0.856 |
| lignocerate | -0.537 | -0.794 |
| oleate | -0.625 | -0.037 |
| phosphatidylcholine | -0.618 | -0.545 |
| acetate | 0.56 | -1.084 |
| glucAc | -0.957 | -0.474 |
| Rv0950ko | 0.856 | 0.552 |
| Rv1096ko | 1.007 | 1.725 |
| Rv3684ko | 1.411 | 1.326 |
| delta_otsA_trehalose | -0.122 | 0.111 |