Top 10 genes with highest correlation to Rv0875c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1287/- | (cc=0.5084) | info on Rv1287/- |
| Rv1957/- | (cc=0.4839) | info on Rv1957/- |
| Rv1446c/opcA | (cc=0.4769) | info on Rv1446c/opcA |
| Rv1274/lprB | (cc=0.4761) | info on Rv1274/lprB |
| Rv2467/pepN | (cc=0.4703) | info on Rv2467/pepN |
| Rv0228/- | (cc=0.467) | info on Rv0228/- |
| Rv1180/pks3 | (cc=0.4527) | info on Rv1180/pks3 |
| Rv2032/acg | (cc=0.4496) | info on Rv2032/acg |
| Rv3175/- | (cc=0.4494) | info on Rv3175/- |
| Rv0006/gyrA | (cc=0.4444) | info on Rv0006/gyrA |
Correlation of Rv0875c/- with Rv3175/-
Normalized LFCs for Rv0875c/-:
(description and provenance of datasets)
| Rv0875c/- | Rv3175/- | |
| Fe_supp_jason_reseq | 1.274 | -0.834 |
| low_pH_jason_reseq | 2.844 | 1.916 |
| NO_jason_reseq | -0.331 | 0.683 |
| B6_jason_reseq | 0.97 | -0.048 |
| MHCII_jason_reseq | 1.244 | 0.534 |
| Isoniazid02 | 0.383 | 0.623 |
| Rifampicin4 | -0.558 | -0.084 |
| Ethambutol3 | 0.415 | 0.565 |
| Meropenem3 | 1.899 | 1.167 |
| Vancomycin16 | 0.247 | 0.236 |
| Rv2680_day32 | -1.357 | -0.462 |
| H37Rv_KO_MarP | -0.157 | -0.322 |
| hypoxia_3wks | 0.0 | 0.076 |
| hypoxia_6wks | -0.263 | -0.894 |
| glycerol | -0.686 | -0.889 |
| cholesterol | 0.722 | -0.652 |
| AJ | -0.442 | -0.657 |
| Bibs02 | 1.216 | -0.012 |
| Bibs02c | -0.711 | 0.055 |
| BL6 | -0.768 | -0.05 |
| BL6a | -0.377 | -0.161 |
| BXD01 | -0.8 | 0.0 |
| BXD010 | -0.787 | -0.132 |
| BXD011 | -0.655 | -0.14 |
| BXD03 | -0.831 | -0.582 |
| BXD04 | -0.76 | -0.058 |
| BXD05 | -0.827 | -0.733 |
| BXD06 | -0.351 | 0.225 |
| BXD07 | -0.851 | 0.044 |
| BXD08 | -0.817 | -0.036 |
| BXD09 | -0.863 | -0.605 |
| CAST | -0.284 | 0.073 |
| CCcont | -0.285 | -0.23 |
| DS01 | -1.001 | -0.192 |
| DS02 | -1.336 | 0.057 |
| DS04 | -1.192 | 0.159 |
| DS0c | -1.332 | -0.402 |
| GP01 | -0.607 | -0.28 |
| GP02 | -0.511 | -1.456 |
| GP0c | -0.799 | -0.241 |
| NOD | -1.38 | -0.47 |
| NZO | -1.225 | -0.897 |
| PWK | -0.666 | -0.23 |
| H37Rv_KO_CtpC | 0.0 | -0.011 |
| H37Rv_KO_CtpD | -0.537 | 0.185 |
| H37Rv_KO_Rv1272 | -0.174 | -1.097 |
| H37Rv_KO_SugABC | -0.608 | -0.102 |
| H37Rv_KO_MbtN | 0.166 | -0.136 |
| Trans05 | -0.672 | -0.097 |
| macrophage_unactivated | -0.83 | 0.253 |
| IL1 | -0.78 | -0.249 |
| Rapamycin | -0.807 | 0.061 |
| Tcell | -0.857 | -0.528 |
| GMCSF | -0.694 | 0.528 |
| IFNab | -0.795 | -0.094 |
| IFNg | -0.703 | 0.214 |
| IFNg_GMCSF1 | -0.826 | 0.657 |
| Rv1432_day32 | 0.0 | 0.609 |
| Rv1565c_day32 | 0.13 | 0.316 |
| secA2_input | 2.678 | 0.322 |
| delta_Rv3594 | -0.855 | -0.835 |
| delta_Rv3717 | 0.064 | -1.226 |
| delta_Rv3811 | -0.831 | -1.692 |
| delta_Rv0954 | 0.618 | -0.444 |
| PonA1 | -0.931 | -0.422 |
| EccD1_KO | 0.306 | 0.763 |
| EspI_KO | 2.567 | 0.827 |
| PE35_KO | 0.137 | 0.131 |
| PPE68_KO | 0.15 | -0.304 |
| glycerol2 | -0.531 | 0.077 |
| lignocerate | -0.462 | 0.144 |
| oleate | -0.537 | 0.578 |
| phosphatidylcholine | -0.531 | 0.165 |
| acetate | 0.178 | 0.281 |
| glucAc | -0.392 | 0.085 |
| Rv0950ko | -0.89 | -0.305 |
| Rv1096ko | 0.0 | 0.866 |
| Rv3684ko | 0.802 | 1.133 |
| delta_otsA_trehalose | 1.33 | -0.192 |