Top 10 genes with highest correlation to Rv0875c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1287/- | (cc=0.5084) | info on Rv1287/- |
| Rv1957/- | (cc=0.4839) | info on Rv1957/- |
| Rv1446c/opcA | (cc=0.4769) | info on Rv1446c/opcA |
| Rv1274/lprB | (cc=0.4761) | info on Rv1274/lprB |
| Rv2467/pepN | (cc=0.4703) | info on Rv2467/pepN |
| Rv0228/- | (cc=0.467) | info on Rv0228/- |
| Rv1180/pks3 | (cc=0.4527) | info on Rv1180/pks3 |
| Rv2032/acg | (cc=0.4496) | info on Rv2032/acg |
| Rv3175/- | (cc=0.4494) | info on Rv3175/- |
| Rv0006/gyrA | (cc=0.4444) | info on Rv0006/gyrA |
Correlation of Rv0875c/- with Rv2032/acg
Normalized LFCs for Rv0875c/-:
(description and provenance of datasets)
| Rv0875c/- | Rv2032/acg | |
| Fe_supp_jason_reseq | 1.274 | -0.469 |
| low_pH_jason_reseq | 2.844 | 0.0 |
| NO_jason_reseq | -0.331 | -0.57 |
| B6_jason_reseq | 0.97 | 2.379 |
| MHCII_jason_reseq | 1.244 | 2.236 |
| Isoniazid02 | 0.383 | -0.064 |
| Rifampicin4 | -0.558 | -0.06 |
| Ethambutol3 | 0.415 | 0.613 |
| Meropenem3 | 1.899 | 0.025 |
| Vancomycin16 | 0.247 | -0.117 |
| Rv2680_day32 | -1.357 | 0.257 |
| H37Rv_KO_MarP | -0.157 | 0.399 |
| hypoxia_3wks | 0.0 | 3.752 |
| hypoxia_6wks | -0.263 | 1.817 |
| glycerol | -0.686 | -1.296 |
| cholesterol | 0.722 | -0.834 |
| AJ | -0.442 | -0.131 |
| Bibs02 | 1.216 | 0.457 |
| Bibs02c | -0.711 | -0.026 |
| BL6 | -0.768 | -0.581 |
| BL6a | -0.377 | -0.604 |
| BXD01 | -0.8 | -1.228 |
| BXD010 | -0.787 | -1.266 |
| BXD011 | -0.655 | -1.107 |
| BXD03 | -0.831 | -0.963 |
| BXD04 | -0.76 | -0.991 |
| BXD05 | -0.827 | -1.374 |
| BXD06 | -0.351 | -1.278 |
| BXD07 | -0.851 | -1.165 |
| BXD08 | -0.817 | -1.595 |
| BXD09 | -0.863 | -1.126 |
| CAST | -0.284 | -0.484 |
| CCcont | -0.285 | -1.407 |
| DS01 | -1.001 | -0.245 |
| DS02 | -1.336 | -0.377 |
| DS04 | -1.192 | -0.528 |
| DS0c | -1.332 | -1.136 |
| GP01 | -0.607 | -0.537 |
| GP02 | -0.511 | -1.326 |
| GP0c | -0.799 | -1.559 |
| NOD | -1.38 | -0.74 |
| NZO | -1.225 | 0.165 |
| PWK | -0.666 | 0.344 |
| H37Rv_KO_CtpC | 0.0 | -2.219 |
| H37Rv_KO_CtpD | -0.537 | -1.594 |
| H37Rv_KO_Rv1272 | -0.174 | -0.027 |
| H37Rv_KO_SugABC | -0.608 | -2.514 |
| H37Rv_KO_MbtN | 0.166 | -0.685 |
| Trans05 | -0.672 | -0.795 |
| macrophage_unactivated | -0.83 | -1.471 |
| IL1 | -0.78 | -0.854 |
| Rapamycin | -0.807 | -1.43 |
| Tcell | -0.857 | -0.994 |
| GMCSF | -0.694 | -0.301 |
| IFNab | -0.795 | -1.527 |
| IFNg | -0.703 | -0.468 |
| IFNg_GMCSF1 | -0.826 | -0.044 |
| Rv1432_day32 | 0.0 | -0.136 |
| Rv1565c_day32 | 0.13 | -0.346 |
| secA2_input | 2.678 | 1.871 |
| delta_Rv3594 | -0.855 | 0.288 |
| delta_Rv3717 | 0.064 | -0.131 |
| delta_Rv3811 | -0.831 | 0.28 |
| delta_Rv0954 | 0.618 | -0.309 |
| PonA1 | -0.931 | -1.3 |
| EccD1_KO | 0.306 | 0.395 |
| EspI_KO | 2.567 | 0.088 |
| PE35_KO | 0.137 | 0.674 |
| PPE68_KO | 0.15 | 0.195 |
| glycerol2 | -0.531 | -0.572 |
| lignocerate | -0.462 | -0.099 |
| oleate | -0.537 | -0.367 |
| phosphatidylcholine | -0.531 | -0.298 |
| acetate | 0.178 | 0.731 |
| glucAc | -0.392 | -0.084 |
| Rv0950ko | -0.89 | -1.007 |
| Rv1096ko | 0.0 | 0.22 |
| Rv3684ko | 0.802 | -0.517 |
| delta_otsA_trehalose | 1.33 | 0.861 |