Top 10 genes with highest correlation to Rv0875c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1287/- | (cc=0.5084) | info on Rv1287/- |
| Rv1957/- | (cc=0.4839) | info on Rv1957/- |
| Rv1446c/opcA | (cc=0.4769) | info on Rv1446c/opcA |
| Rv1274/lprB | (cc=0.4761) | info on Rv1274/lprB |
| Rv2467/pepN | (cc=0.4703) | info on Rv2467/pepN |
| Rv0228/- | (cc=0.467) | info on Rv0228/- |
| Rv1180/pks3 | (cc=0.4527) | info on Rv1180/pks3 |
| Rv2032/acg | (cc=0.4496) | info on Rv2032/acg |
| Rv3175/- | (cc=0.4494) | info on Rv3175/- |
| Rv0006/gyrA | (cc=0.4444) | info on Rv0006/gyrA |
Correlation of Rv0875c/- with Rv1180/pks3
Normalized LFCs for Rv0875c/-:
(description and provenance of datasets)
| Rv0875c/- | Rv1180/pks3 | |
| Fe_supp_jason_reseq | 1.274 | -0.279 |
| low_pH_jason_reseq | 2.844 | 2.652 |
| NO_jason_reseq | -0.331 | 0.0 |
| B6_jason_reseq | 0.97 | 2.843 |
| MHCII_jason_reseq | 1.244 | 3.318 |
| Isoniazid02 | 0.383 | -0.345 |
| Rifampicin4 | -0.558 | -0.374 |
| Ethambutol3 | 0.415 | 0.176 |
| Meropenem3 | 1.899 | -0.865 |
| Vancomycin16 | 0.247 | 0.225 |
| Rv2680_day32 | -1.357 | -0.493 |
| H37Rv_KO_MarP | -0.157 | 0.415 |
| hypoxia_3wks | 0.0 | -0.319 |
| hypoxia_6wks | -0.263 | 0.234 |
| glycerol | -0.686 | -0.016 |
| cholesterol | 0.722 | 0.163 |
| AJ | -0.442 | 0.356 |
| Bibs02 | 1.216 | -0.254 |
| Bibs02c | -0.711 | 0.646 |
| BL6 | -0.768 | -2.892 |
| BL6a | -0.377 | -0.405 |
| BXD01 | -0.8 | -2.644 |
| BXD010 | -0.787 | -1.603 |
| BXD011 | -0.655 | -2.421 |
| BXD03 | -0.831 | -1.964 |
| BXD04 | -0.76 | -1.702 |
| BXD05 | -0.827 | -1.519 |
| BXD06 | -0.351 | -2.271 |
| BXD07 | -0.851 | -2.302 |
| BXD08 | -0.817 | -2.404 |
| BXD09 | -0.863 | -2.206 |
| CAST | -0.284 | 0.307 |
| CCcont | -0.285 | -2.242 |
| DS01 | -1.001 | 0.371 |
| DS02 | -1.336 | 0.298 |
| DS04 | -1.192 | 0.292 |
| DS0c | -1.332 | 0.093 |
| GP01 | -0.607 | -1.877 |
| GP02 | -0.511 | -1.623 |
| GP0c | -0.799 | -3.264 |
| NOD | -1.38 | -0.194 |
| NZO | -1.225 | 0.069 |
| PWK | -0.666 | 0.374 |
| H37Rv_KO_CtpC | 0.0 | -1.492 |
| H37Rv_KO_CtpD | -0.537 | -2.799 |
| H37Rv_KO_Rv1272 | -0.174 | -2.581 |
| H37Rv_KO_SugABC | -0.608 | -1.747 |
| H37Rv_KO_MbtN | 0.166 | -1.345 |
| Trans05 | -0.672 | -1.761 |
| macrophage_unactivated | -0.83 | -3.27 |
| IL1 | -0.78 | -2.174 |
| Rapamycin | -0.807 | -1.534 |
| Tcell | -0.857 | -3.454 |
| GMCSF | -0.694 | -2.609 |
| IFNab | -0.795 | -2.276 |
| IFNg | -0.703 | -3.175 |
| IFNg_GMCSF1 | -0.826 | -1.518 |
| Rv1432_day32 | 0.0 | 0.411 |
| Rv1565c_day32 | 0.13 | 0.692 |
| secA2_input | 2.678 | 0.944 |
| delta_Rv3594 | -0.855 | 0.2 |
| delta_Rv3717 | 0.064 | -1.016 |
| delta_Rv3811 | -0.831 | -1.142 |
| delta_Rv0954 | 0.618 | -1.262 |
| PonA1 | -0.931 | 0.077 |
| EccD1_KO | 0.306 | 1.457 |
| EspI_KO | 2.567 | -0.106 |
| PE35_KO | 0.137 | 0.694 |
| PPE68_KO | 0.15 | 0.557 |
| glycerol2 | -0.531 | -0.684 |
| lignocerate | -0.462 | 0.737 |
| oleate | -0.537 | -0.489 |
| phosphatidylcholine | -0.531 | -0.066 |
| acetate | 0.178 | -0.299 |
| glucAc | -0.392 | -0.016 |
| Rv0950ko | -0.89 | 1.227 |
| Rv1096ko | 0.0 | 0.826 |
| Rv3684ko | 0.802 | 0.419 |
| delta_otsA_trehalose | 1.33 | 0.724 |