Top 10 genes with highest correlation to Rv0875c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1287/- | (cc=0.5084) | info on Rv1287/- |
| Rv1957/- | (cc=0.4839) | info on Rv1957/- |
| Rv1446c/opcA | (cc=0.4769) | info on Rv1446c/opcA |
| Rv1274/lprB | (cc=0.4761) | info on Rv1274/lprB |
| Rv2467/pepN | (cc=0.4703) | info on Rv2467/pepN |
| Rv0228/- | (cc=0.467) | info on Rv0228/- |
| Rv1180/pks3 | (cc=0.4527) | info on Rv1180/pks3 |
| Rv2032/acg | (cc=0.4496) | info on Rv2032/acg |
| Rv3175/- | (cc=0.4494) | info on Rv3175/- |
| Rv0006/gyrA | (cc=0.4444) | info on Rv0006/gyrA |
Correlation of Rv0875c/- with Rv1957/-
Normalized LFCs for Rv0875c/-:
(description and provenance of datasets)
| Rv0875c/- | Rv1957/- | |
| Fe_supp_jason_reseq | 1.274 | 1.407 |
| low_pH_jason_reseq | 2.844 | 3.15 |
| NO_jason_reseq | -0.331 | 2.964 |
| B6_jason_reseq | 0.97 | 0.409 |
| MHCII_jason_reseq | 1.244 | -0.92 |
| Isoniazid02 | 0.383 | 2.437 |
| Rifampicin4 | -0.558 | 2.071 |
| Ethambutol3 | 0.415 | 0.969 |
| Meropenem3 | 1.899 | 3.317 |
| Vancomycin16 | 0.247 | 0.287 |
| Rv2680_day32 | -1.357 | -1.63 |
| H37Rv_KO_MarP | -0.157 | 0.986 |
| hypoxia_3wks | 0.0 | -1.691 |
| hypoxia_6wks | -0.263 | -0.474 |
| glycerol | -0.686 | -1.315 |
| cholesterol | 0.722 | -0.606 |
| AJ | -0.442 | -2.336 |
| Bibs02 | 1.216 | -0.856 |
| Bibs02c | -0.711 | -1.087 |
| BL6 | -0.768 | -2.131 |
| BL6a | -0.377 | -1.029 |
| BXD01 | -0.8 | -2.293 |
| BXD010 | -0.787 | -0.784 |
| BXD011 | -0.655 | -0.617 |
| BXD03 | -0.831 | -1.054 |
| BXD04 | -0.76 | -2.107 |
| BXD05 | -0.827 | -1.474 |
| BXD06 | -0.351 | -0.981 |
| BXD07 | -0.851 | -2.359 |
| BXD08 | -0.817 | -2.595 |
| BXD09 | -0.863 | -1.161 |
| CAST | -0.284 | -2.132 |
| CCcont | -0.285 | -0.531 |
| DS01 | -1.001 | -1.312 |
| DS02 | -1.336 | -2.382 |
| DS04 | -1.192 | -1.303 |
| DS0c | -1.332 | -1.205 |
| GP01 | -0.607 | -2.156 |
| GP02 | -0.511 | -1.976 |
| GP0c | -0.799 | -0.587 |
| NOD | -1.38 | -2.603 |
| NZO | -1.225 | -1.696 |
| PWK | -0.666 | -1.921 |
| H37Rv_KO_CtpC | 0.0 | -0.392 |
| H37Rv_KO_CtpD | -0.537 | -1.14 |
| H37Rv_KO_Rv1272 | -0.174 | -1.73 |
| H37Rv_KO_SugABC | -0.608 | -0.997 |
| H37Rv_KO_MbtN | 0.166 | 2.194 |
| Trans05 | -0.672 | -1.28 |
| macrophage_unactivated | -0.83 | -2.004 |
| IL1 | -0.78 | -0.3 |
| Rapamycin | -0.807 | -0.822 |
| Tcell | -0.857 | 1.372 |
| GMCSF | -0.694 | -1.883 |
| IFNab | -0.795 | -2.533 |
| IFNg | -0.703 | -0.716 |
| IFNg_GMCSF1 | -0.826 | -0.751 |
| Rv1432_day32 | 0.0 | -2.78 |
| Rv1565c_day32 | 0.13 | -3.941 |
| secA2_input | 2.678 | 1.324 |
| delta_Rv3594 | -0.855 | 1.947 |
| delta_Rv3717 | 0.064 | 4.691 |
| delta_Rv3811 | -0.831 | 1.893 |
| delta_Rv0954 | 0.618 | 1.749 |
| PonA1 | -0.931 | -0.819 |
| EccD1_KO | 0.306 | -0.069 |
| EspI_KO | 2.567 | -0.12 |
| PE35_KO | 0.137 | 1.059 |
| PPE68_KO | 0.15 | 1.648 |
| glycerol2 | -0.531 | -0.601 |
| lignocerate | -0.462 | -1.88 |
| oleate | -0.537 | -1.948 |
| phosphatidylcholine | -0.531 | -1.852 |
| acetate | 0.178 | -0.291 |
| glucAc | -0.392 | 0.254 |
| Rv0950ko | -0.89 | 0.784 |
| Rv1096ko | 0.0 | -0.247 |
| Rv3684ko | 0.802 | 0.675 |
| delta_otsA_trehalose | 1.33 | 0.514 |