Top 10 genes with highest correlation to Rv0830/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3109/moaA1 | (cc=0.5729) | info on Rv3109/moaA1 |
| Rv1087A/- | (cc=0.5419) | info on Rv1087A/- |
| Rv3738c/PPE66 | (cc=0.5249) | info on Rv3738c/PPE66 |
| Rv2267c/- | (cc=0.5247) | info on Rv2267c/- |
| Rv0755A/- | (cc=0.5195) | info on Rv0755A/- |
| Rv2424c/- | (cc=0.5054) | info on Rv2424c/- |
| Rv2958c/- | (cc=0.4928) | info on Rv2958c/- |
| Rv2092c/helY | (cc=0.4855) | info on Rv2092c/helY |
| Rv2957/- | (cc=0.4806) | info on Rv2957/- |
| Rv1916/aceAb | (cc=0.4798) | info on Rv1916/aceAb |
Correlation of Rv0830/- with Rv1087A/-
Normalized LFCs for Rv0830/-:
(description and provenance of datasets)
| Rv0830/- | Rv1087A/- | |
| Fe_supp_jason_reseq | 0.148 | 0.453 |
| low_pH_jason_reseq | -0.279 | -1.086 |
| NO_jason_reseq | 0.357 | 0.123 |
| B6_jason_reseq | 0.739 | 1.213 |
| MHCII_jason_reseq | 0.519 | 1.116 |
| Isoniazid02 | -1.003 | 0.035 |
| Rifampicin4 | 0.417 | 0.398 |
| Ethambutol3 | 0.027 | -0.103 |
| Meropenem3 | -0.343 | -1.94 |
| Vancomycin16 | -0.223 | -0.875 |
| Rv2680_day32 | 0.08 | 0.296 |
| H37Rv_KO_MarP | 0.042 | 0.066 |
| hypoxia_3wks | -0.435 | -0.686 |
| hypoxia_6wks | -0.159 | -0.844 |
| glycerol | -0.859 | -1.915 |
| cholesterol | -0.552 | -1.713 |
| AJ | 0.481 | -0.182 |
| Bibs02 | 0.367 | 0.041 |
| Bibs02c | 0.202 | 0.115 |
| BL6 | 0.037 | -0.445 |
| BL6a | 0.141 | -0.099 |
| BXD01 | 0.167 | -0.927 |
| BXD010 | -0.117 | -0.156 |
| BXD011 | -0.097 | -0.253 |
| BXD03 | -0.453 | -0.731 |
| BXD04 | -0.127 | -0.476 |
| BXD05 | 0.288 | -0.178 |
| BXD06 | -0.154 | -1.182 |
| BXD07 | -0.126 | -0.407 |
| BXD08 | 0.018 | -0.761 |
| BXD09 | -0.004 | -0.564 |
| CAST | 0.21 | 0.22 |
| CCcont | -0.295 | -0.654 |
| DS01 | -0.258 | -0.38 |
| DS02 | 0.274 | 0.151 |
| DS04 | -0.103 | -0.389 |
| DS0c | 0.204 | -0.288 |
| GP01 | 0.444 | -1.407 |
| GP02 | 1.298 | -0.019 |
| GP0c | -0.138 | -1.673 |
| NOD | 0.205 | -0.677 |
| NZO | 0.285 | 0.351 |
| PWK | 0.459 | 0.233 |
| H37Rv_KO_CtpC | 0.477 | -0.031 |
| H37Rv_KO_CtpD | 0.225 | 0.673 |
| H37Rv_KO_Rv1272 | 0.56 | 0.166 |
| H37Rv_KO_SugABC | 0.499 | 0.715 |
| H37Rv_KO_MbtN | -0.078 | -0.102 |
| Trans05 | 0.684 | 0.132 |
| macrophage_unactivated | 0.237 | -0.578 |
| IL1 | -0.564 | -0.51 |
| Rapamycin | -0.292 | -1.111 |
| Tcell | 0.274 | -0.727 |
| GMCSF | 0.185 | -0.283 |
| IFNab | -0.19 | -1.246 |
| IFNg | -0.211 | -0.898 |
| IFNg_GMCSF1 | -0.066 | -0.314 |
| Rv1432_day32 | 0.023 | 0.447 |
| Rv1565c_day32 | 0.242 | 0.423 |
| secA2_input | -0.204 | -0.823 |
| delta_Rv3594 | -0.341 | 0.032 |
| delta_Rv3717 | -0.507 | -1.053 |
| delta_Rv3811 | -0.656 | -1.044 |
| delta_Rv0954 | -0.682 | -0.009 |
| PonA1 | -0.446 | -0.631 |
| EccD1_KO | 0.967 | 0.671 |
| EspI_KO | 0.034 | 0.873 |
| PE35_KO | -0.067 | 0.187 |
| PPE68_KO | 0.643 | -0.038 |
| glycerol2 | 0.409 | 0.581 |
| lignocerate | 0.269 | 0.592 |
| oleate | 0.668 | 0.296 |
| phosphatidylcholine | 0.655 | 0.769 |
| acetate | -0.136 | 0.326 |
| glucAc | -0.005 | 0.52 |
| Rv0950ko | 0.28 | 0.365 |
| Rv1096ko | -0.401 | -0.075 |
| Rv3684ko | -0.229 | -0.151 |
| delta_otsA_trehalose | 0.579 | -0.724 |