Top 10 genes with highest correlation to Rv0771/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0306/- | (cc=0.5274) | info on Rv0306/- |
| Rv3032/- | (cc=0.5215) | info on Rv3032/- |
| Rv1208/gpgS | (cc=0.5165) | info on Rv1208/gpgS |
| Rv2424c/- | (cc=0.4995) | info on Rv2424c/- |
| Rv0084/hycD | (cc=0.4796) | info on Rv0084/hycD |
| Rv2306B/- | (cc=0.4762) | info on Rv2306B/- |
| Rv2980/- | (cc=0.4756) | info on Rv2980/- |
| Rv3055/- | (cc=0.4717) | info on Rv3055/- |
| Rv1153c/omt | (cc=0.4498) | info on Rv1153c/omt |
| Rv3548c/- | (cc=0.4462) | info on Rv3548c/- |
Correlation of Rv0771/- with Rv3548c/-
Normalized LFCs for Rv0771/-:
(description and provenance of datasets)
| Rv0771/- | Rv3548c/- | |
| Fe_supp_jason_reseq | 0.077 | 0.011 |
| low_pH_jason_reseq | 0.266 | 0.055 |
| NO_jason_reseq | -0.517 | -0.289 |
| B6_jason_reseq | 0.257 | -0.87 |
| MHCII_jason_reseq | 0.977 | -1.699 |
| Isoniazid02 | 0.259 | -2.075 |
| Rifampicin4 | 0.046 | 0.842 |
| Ethambutol3 | -0.562 | -1.437 |
| Meropenem3 | -0.242 | -1.192 |
| Vancomycin16 | 1.398 | -0.483 |
| Rv2680_day32 | -0.281 | 0.312 |
| H37Rv_KO_MarP | 0.436 | 0.167 |
| hypoxia_3wks | 0.275 | 0.239 |
| hypoxia_6wks | 0.47 | -0.566 |
| glycerol | -1.498 | 0.293 |
| cholesterol | -1.152 | -2.509 |
| AJ | 0.746 | -0.988 |
| Bibs02 | 0.634 | -0.918 |
| Bibs02c | -0.456 | -1.763 |
| BL6 | 1.053 | -0.912 |
| BL6a | -0.105 | -1.779 |
| BXD01 | 0.581 | -0.336 |
| BXD010 | 0.338 | 0.415 |
| BXD011 | 0.284 | -1.35 |
| BXD03 | -0.239 | -0.332 |
| BXD04 | 0.714 | -1.169 |
| BXD05 | 0.142 | -1.091 |
| BXD06 | 0.192 | -0.802 |
| BXD07 | 0.428 | -0.445 |
| BXD08 | 0.775 | -0.393 |
| BXD09 | 0.116 | -1.025 |
| CAST | -0.43 | -0.866 |
| CCcont | 0.616 | -0.394 |
| DS01 | -0.347 | -0.522 |
| DS02 | -0.769 | 0.559 |
| DS04 | 0.221 | -0.476 |
| DS0c | 0.074 | 0.052 |
| GP01 | 0.178 | 0.461 |
| GP02 | -0.948 | -1.36 |
| GP0c | -0.284 | -0.535 |
| NOD | 0.076 | 0.535 |
| NZO | 0.539 | 0.61 |
| PWK | 0.854 | -0.308 |
| H37Rv_KO_CtpC | -0.115 | -0.512 |
| H37Rv_KO_CtpD | -1.731 | -1.734 |
| H37Rv_KO_Rv1272 | 0.012 | -0.253 |
| H37Rv_KO_SugABC | 0.05 | 0.352 |
| H37Rv_KO_MbtN | -1.027 | -0.987 |
| Trans05 | 0.149 | 0.356 |
| macrophage_unactivated | -0.129 | -1.354 |
| IL1 | -0.851 | -1.747 |
| Rapamycin | 0.353 | -0.783 |
| Tcell | -0.935 | -3.965 |
| GMCSF | 0.106 | -0.428 |
| IFNab | -0.218 | -0.889 |
| IFNg | -0.834 | -2.245 |
| IFNg_GMCSF1 | -0.031 | -0.594 |
| Rv1432_day32 | -0.083 | -1.697 |
| Rv1565c_day32 | 0.523 | -0.4 |
| secA2_input | 0.0 | -0.348 |
| delta_Rv3594 | 0.991 | -0.872 |
| delta_Rv3717 | -0.17 | -0.471 |
| delta_Rv3811 | -0.272 | -1.901 |
| delta_Rv0954 | -0.509 | -0.703 |
| PonA1 | 0.0 | 0.199 |
| EccD1_KO | 1.345 | 1.043 |
| EspI_KO | 2.227 | 0.074 |
| PE35_KO | 1.878 | 0.475 |
| PPE68_KO | 2.665 | 0.522 |
| glycerol2 | 0.814 | 0.336 |
| lignocerate | 0.816 | 0.244 |
| oleate | 0.713 | 0.095 |
| phosphatidylcholine | 1.035 | 0.074 |
| acetate | 0.776 | 0.025 |
| glucAc | 0.539 | 0.165 |
| Rv0950ko | -0.106 | -0.22 |
| Rv1096ko | 1.381 | 0.582 |
| Rv3684ko | 0.056 | -0.639 |
| delta_otsA_trehalose | 0.687 | -0.74 |