Top 10 genes with highest correlation to Rv0771/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0306/- | (cc=0.5274) | info on Rv0306/- |
| Rv3032/- | (cc=0.5215) | info on Rv3032/- |
| Rv1208/gpgS | (cc=0.5165) | info on Rv1208/gpgS |
| Rv2424c/- | (cc=0.4995) | info on Rv2424c/- |
| Rv0084/hycD | (cc=0.4796) | info on Rv0084/hycD |
| Rv2306B/- | (cc=0.4762) | info on Rv2306B/- |
| Rv2980/- | (cc=0.4756) | info on Rv2980/- |
| Rv3055/- | (cc=0.4717) | info on Rv3055/- |
| Rv1153c/omt | (cc=0.4498) | info on Rv1153c/omt |
| Rv3548c/- | (cc=0.4462) | info on Rv3548c/- |
Correlation of Rv0771/- with Rv0084/hycD
Normalized LFCs for Rv0771/-:
(description and provenance of datasets)
| Rv0771/- | Rv0084/hycD | |
| Fe_supp_jason_reseq | 0.077 | -1.171 |
| low_pH_jason_reseq | 0.266 | 0.432 |
| NO_jason_reseq | -0.517 | -1.024 |
| B6_jason_reseq | 0.257 | -0.769 |
| MHCII_jason_reseq | 0.977 | -1.214 |
| Isoniazid02 | 0.259 | 0.058 |
| Rifampicin4 | 0.046 | 0.601 |
| Ethambutol3 | -0.562 | -0.05 |
| Meropenem3 | -0.242 | -0.435 |
| Vancomycin16 | 1.398 | 0.544 |
| Rv2680_day32 | -0.281 | -1.581 |
| H37Rv_KO_MarP | 0.436 | 0.356 |
| hypoxia_3wks | 0.275 | -0.77 |
| hypoxia_6wks | 0.47 | -0.804 |
| glycerol | -1.498 | 1.167 |
| cholesterol | -1.152 | 0.132 |
| AJ | 0.746 | 0.054 |
| Bibs02 | 0.634 | -1.005 |
| Bibs02c | -0.456 | 0.767 |
| BL6 | 1.053 | -0.045 |
| BL6a | -0.105 | -0.595 |
| BXD01 | 0.581 | -1.074 |
| BXD010 | 0.338 | -0.469 |
| BXD011 | 0.284 | -0.305 |
| BXD03 | -0.239 | -0.344 |
| BXD04 | 0.714 | -0.632 |
| BXD05 | 0.142 | -0.342 |
| BXD06 | 0.192 | -0.133 |
| BXD07 | 0.428 | 0.228 |
| BXD08 | 0.775 | -0.814 |
| BXD09 | 0.116 | -0.491 |
| CAST | -0.43 | -1.176 |
| CCcont | 0.616 | 0.087 |
| DS01 | -0.347 | -0.115 |
| DS02 | -0.769 | -0.274 |
| DS04 | 0.221 | 0.415 |
| DS0c | 0.074 | -0.245 |
| GP01 | 0.178 | -2.056 |
| GP02 | -0.948 | -1.663 |
| GP0c | -0.284 | -1.292 |
| NOD | 0.076 | -1.575 |
| NZO | 0.539 | 0.202 |
| PWK | 0.854 | 0.8 |
| H37Rv_KO_CtpC | -0.115 | -0.413 |
| H37Rv_KO_CtpD | -1.731 | -1.516 |
| H37Rv_KO_Rv1272 | 0.012 | 0.049 |
| H37Rv_KO_SugABC | 0.05 | -1.262 |
| H37Rv_KO_MbtN | -1.027 | -1.771 |
| Trans05 | 0.149 | -1.614 |
| macrophage_unactivated | -0.129 | -1.076 |
| IL1 | -0.851 | -0.392 |
| Rapamycin | 0.353 | 0.942 |
| Tcell | -0.935 | -0.958 |
| GMCSF | 0.106 | 0.916 |
| IFNab | -0.218 | -0.079 |
| IFNg | -0.834 | -0.353 |
| IFNg_GMCSF1 | -0.031 | -0.641 |
| Rv1432_day32 | -0.083 | -0.353 |
| Rv1565c_day32 | 0.523 | -1.494 |
| secA2_input | 0.0 | -0.742 |
| delta_Rv3594 | 0.991 | -0.895 |
| delta_Rv3717 | -0.17 | -0.405 |
| delta_Rv3811 | -0.272 | 0.842 |
| delta_Rv0954 | -0.509 | -1.905 |
| PonA1 | 0.0 | -1.27 |
| EccD1_KO | 1.345 | 1.595 |
| EspI_KO | 2.227 | 1.184 |
| PE35_KO | 1.878 | 2.917 |
| PPE68_KO | 2.665 | 3.2 |
| glycerol2 | 0.814 | 0.311 |
| lignocerate | 0.816 | 1.581 |
| oleate | 0.713 | -1.791 |
| phosphatidylcholine | 1.035 | 0.517 |
| acetate | 0.776 | 1.807 |
| glucAc | 0.539 | 1.618 |
| Rv0950ko | -0.106 | -0.88 |
| Rv1096ko | 1.381 | 0.121 |
| Rv3684ko | 0.056 | -0.203 |
| delta_otsA_trehalose | 0.687 | -0.843 |