Top 10 genes with highest correlation to Rv0771/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0306/- | (cc=0.5274) | info on Rv0306/- |
| Rv3032/- | (cc=0.5215) | info on Rv3032/- |
| Rv1208/gpgS | (cc=0.5165) | info on Rv1208/gpgS |
| Rv2424c/- | (cc=0.4995) | info on Rv2424c/- |
| Rv0084/hycD | (cc=0.4796) | info on Rv0084/hycD |
| Rv2306B/- | (cc=0.4762) | info on Rv2306B/- |
| Rv2980/- | (cc=0.4756) | info on Rv2980/- |
| Rv3055/- | (cc=0.4717) | info on Rv3055/- |
| Rv1153c/omt | (cc=0.4498) | info on Rv1153c/omt |
| Rv3548c/- | (cc=0.4462) | info on Rv3548c/- |
Correlation of Rv0771/- with Rv3055/-
Normalized LFCs for Rv0771/-:
(description and provenance of datasets)
| Rv0771/- | Rv3055/- | |
| Fe_supp_jason_reseq | 0.077 | -0.038 |
| low_pH_jason_reseq | 0.266 | -1.819 |
| NO_jason_reseq | -0.517 | -1.748 |
| B6_jason_reseq | 0.257 | -0.069 |
| MHCII_jason_reseq | 0.977 | -0.203 |
| Isoniazid02 | 0.259 | 0.0 |
| Rifampicin4 | 0.046 | 0.306 |
| Ethambutol3 | -0.562 | 0.95 |
| Meropenem3 | -0.242 | 1.065 |
| Vancomycin16 | 1.398 | 0.554 |
| Rv2680_day32 | -0.281 | 0.761 |
| H37Rv_KO_MarP | 0.436 | 0.354 |
| hypoxia_3wks | 0.275 | -0.347 |
| hypoxia_6wks | 0.47 | -1.042 |
| glycerol | -1.498 | -0.515 |
| cholesterol | -1.152 | -1.488 |
| AJ | 0.746 | 0.042 |
| Bibs02 | 0.634 | -0.523 |
| Bibs02c | -0.456 | -0.703 |
| BL6 | 1.053 | -0.993 |
| BL6a | -0.105 | -0.894 |
| BXD01 | 0.581 | -0.426 |
| BXD010 | 0.338 | -1.402 |
| BXD011 | 0.284 | -0.563 |
| BXD03 | -0.239 | -0.923 |
| BXD04 | 0.714 | 0.632 |
| BXD05 | 0.142 | -0.967 |
| BXD06 | 0.192 | -1.168 |
| BXD07 | 0.428 | -0.913 |
| BXD08 | 0.775 | -1.242 |
| BXD09 | 0.116 | -1.333 |
| CAST | -0.43 | 0.123 |
| CCcont | 0.616 | -0.225 |
| DS01 | -0.347 | -0.958 |
| DS02 | -0.769 | -1.966 |
| DS04 | 0.221 | 0.298 |
| DS0c | 0.074 | 0.013 |
| GP01 | 0.178 | 0.765 |
| GP02 | -0.948 | 2.108 |
| GP0c | -0.284 | 1.447 |
| NOD | 0.076 | -0.718 |
| NZO | 0.539 | -0.571 |
| PWK | 0.854 | -0.692 |
| H37Rv_KO_CtpC | -0.115 | -1.75 |
| H37Rv_KO_CtpD | -1.731 | -0.895 |
| H37Rv_KO_Rv1272 | 0.012 | -1.317 |
| H37Rv_KO_SugABC | 0.05 | -0.799 |
| H37Rv_KO_MbtN | -1.027 | -0.993 |
| Trans05 | 0.149 | -1.181 |
| macrophage_unactivated | -0.129 | 0.593 |
| IL1 | -0.851 | -0.528 |
| Rapamycin | 0.353 | 0.052 |
| Tcell | -0.935 | -0.58 |
| GMCSF | 0.106 | 0.613 |
| IFNab | -0.218 | -1.088 |
| IFNg | -0.834 | -2.248 |
| IFNg_GMCSF1 | -0.031 | 0.817 |
| Rv1432_day32 | -0.083 | -1.304 |
| Rv1565c_day32 | 0.523 | 0.147 |
| secA2_input | 0.0 | 1.935 |
| delta_Rv3594 | 0.991 | -1.837 |
| delta_Rv3717 | -0.17 | -1.419 |
| delta_Rv3811 | -0.272 | -1.404 |
| delta_Rv0954 | -0.509 | -1.24 |
| PonA1 | 0.0 | -0.39 |
| EccD1_KO | 1.345 | 2.911 |
| EspI_KO | 2.227 | 1.517 |
| PE35_KO | 1.878 | 2.214 |
| PPE68_KO | 2.665 | 3.443 |
| glycerol2 | 0.814 | 1.407 |
| lignocerate | 0.816 | 0.838 |
| oleate | 0.713 | 0.502 |
| phosphatidylcholine | 1.035 | 1.241 |
| acetate | 0.776 | 0.083 |
| glucAc | 0.539 | 0.164 |
| Rv0950ko | -0.106 | -0.727 |
| Rv1096ko | 1.381 | 1.716 |
| Rv3684ko | 0.056 | 0.252 |
| delta_otsA_trehalose | 0.687 | -0.491 |