Top 10 genes with highest correlation to Rv0757/phoP:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0758/phoR | (cc=0.8487) | info on Rv0758/phoR |
| Rv2411c/- | (cc=0.6425) | info on Rv2411c/- |
| Rv0043c/- | (cc=0.6174) | info on Rv0043c/- |
| Rv2613c/- | (cc=0.5985) | info on Rv2613c/- |
| Rv3058c/- | (cc=0.5961) | info on Rv3058c/- |
| Rv3534c/hsaF | (cc=0.5949) | info on Rv3534c/hsaF |
| Rv3883c/mycP1 | (cc=0.5916) | info on Rv3883c/mycP1 |
| Rv3849/espR | (cc=0.5912) | info on Rv3849/espR |
| Rv3616c/espA | (cc=0.59) | info on Rv3616c/espA |
| Rv3136/PPE51 | (cc=0.5882) | info on Rv3136/PPE51 |
Correlation of Rv0757/phoP with Rv2613c/-
Normalized LFCs for Rv0757/phoP:
(description and provenance of datasets)
| Rv0757/phoP | Rv2613c/- | |
| Fe_supp_jason_reseq | 3.743 | 0.268 |
| low_pH_jason_reseq | 2.056 | -1.884 |
| NO_jason_reseq | -3.04 | -2.956 |
| B6_jason_reseq | -0.237 | -1.402 |
| MHCII_jason_reseq | -0.839 | -1.234 |
| Isoniazid02 | -2.642 | -2.196 |
| Rifampicin4 | -2.957 | 0.401 |
| Ethambutol3 | 0.242 | 1.093 |
| Meropenem3 | 0.513 | -0.61 |
| Vancomycin16 | -1.345 | 0.0 |
| Rv2680_day32 | 2.066 | -2.64 |
| H37Rv_KO_MarP | 3.807 | 2.047 |
| hypoxia_3wks | -2.628 | -3.102 |
| hypoxia_6wks | -2.76 | -2.637 |
| glycerol | -6.0 | -0.136 |
| cholesterol | -4.916 | -1.687 |
| AJ | -6.0 | -2.005 |
| Bibs02 | -4.225 | -2.905 |
| Bibs02c | -5.058 | -0.455 |
| BL6 | -4.37 | -2.084 |
| BL6a | -5.384 | -0.729 |
| BXD01 | -4.551 | -2.527 |
| BXD010 | -4.347 | -2.485 |
| BXD011 | -3.528 | -1.765 |
| BXD03 | -4.724 | -2.623 |
| BXD04 | -4.321 | -2.399 |
| BXD05 | -4.702 | -2.477 |
| BXD06 | -4.664 | -2.457 |
| BXD07 | -4.838 | -2.686 |
| BXD08 | -4.647 | -2.58 |
| BXD09 | -4.91 | -2.726 |
| CAST | -6.0 | -3.337 |
| CCcont | -0.89 | -0.355 |
| DS01 | -6.0 | -3.273 |
| DS02 | -5.026 | -3.297 |
| DS04 | -5.373 | -2.572 |
| DS0c | -4.737 | 0.919 |
| GP01 | -3.45 | -1.915 |
| GP02 | -2.907 | -1.614 |
| GP0c | -3.904 | -2.522 |
| NOD | -4.535 | -1.627 |
| NZO | -6.0 | -3.024 |
| PWK | -5.89 | -2.718 |
| H37Rv_KO_CtpC | -4.499 | -1.813 |
| H37Rv_KO_CtpD | -3.111 | -2.457 |
| H37Rv_KO_Rv1272 | -4.54 | -2.736 |
| H37Rv_KO_SugABC | -3.362 | -1.015 |
| H37Rv_KO_MbtN | -2.454 | -1.803 |
| Trans05 | -4.206 | -1.397 |
| macrophage_unactivated | -1.96 | 0.537 |
| IL1 | -1.842 | -2.011 |
| Rapamycin | -1.274 | -0.592 |
| Tcell | -1.678 | -0.629 |
| GMCSF | -2.64 | -0.792 |
| IFNab | -3.023 | -1.636 |
| IFNg | -2.673 | -1.812 |
| IFNg_GMCSF1 | -3.142 | -0.943 |
| Rv1432_day32 | 0.458 | 0.0 |
| Rv1565c_day32 | 1.579 | 2.003 |
| secA2_input | -0.238 | -0.751 |
| delta_Rv3594 | -6.0 | 1.059 |
| delta_Rv3717 | -5.163 | -0.668 |
| delta_Rv3811 | -6.0 | 0.0 |
| delta_Rv0954 | -1.579 | -0.398 |
| PonA1 | -0.548 | -1.592 |
| EccD1_KO | -1.174 | 1.924 |
| EspI_KO | -0.416 | 0.419 |
| PE35_KO | 2.173 | 0.939 |
| PPE68_KO | 1.507 | 1.286 |
| glycerol2 | 0.193 | 1.684 |
| lignocerate | 0.0 | 3.801 |
| oleate | 2.935 | 0.0 |
| phosphatidylcholine | 6.0 | 2.899 |
| acetate | 0.0 | 4.337 |
| glucAc | 0.272 | 3.342 |
| Rv0950ko | 0.299 | -1.013 |
| Rv1096ko | 0.0 | 0.16 |
| Rv3684ko | 0.164 | 0.891 |
| delta_otsA_trehalose | -2.245 | -1.204 |