Top 10 genes with highest correlation to Rv0740/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2644c/- | (cc=0.5214) | info on Rv2644c/- |
| Rv1574/- | (cc=0.5195) | info on Rv1574/- |
| Rv0584/- | (cc=0.4592) | info on Rv0584/- |
| Rv2848c/cobB | (cc=0.4519) | info on Rv2848c/cobB |
| Rv3175/- | (cc=0.4435) | info on Rv3175/- |
| Rv0926c/- | (cc=0.4291) | info on Rv0926c/- |
| Rv0902c/prrB | (cc=0.427) | info on Rv0902c/prrB |
| Rv0601c/- | (cc=0.4226) | info on Rv0601c/- |
| Rv0204c/- | (cc=0.418) | info on Rv0204c/- |
| Rv2901c/- | (cc=0.4103) | info on Rv2901c/- |
Correlation of Rv0740/- with Rv3175/-
Normalized LFCs for Rv0740/-:
(description and provenance of datasets)
| Rv0740/- | Rv3175/- | |
| Fe_supp_jason_reseq | 0.069 | -0.834 |
| low_pH_jason_reseq | 1.802 | 1.916 |
| NO_jason_reseq | 0.774 | 0.683 |
| B6_jason_reseq | 1.02 | -0.048 |
| MHCII_jason_reseq | 0.233 | 0.534 |
| Isoniazid02 | 0.989 | 0.623 |
| Rifampicin4 | 0.087 | -0.084 |
| Ethambutol3 | 1.16 | 0.565 |
| Meropenem3 | 0.688 | 1.167 |
| Vancomycin16 | 0.17 | 0.236 |
| Rv2680_day32 | -1.013 | -0.462 |
| H37Rv_KO_MarP | -0.027 | -0.322 |
| hypoxia_3wks | -1.854 | 0.076 |
| hypoxia_6wks | -1.063 | -0.894 |
| glycerol | -1.09 | -0.889 |
| cholesterol | -0.158 | -0.652 |
| AJ | -0.345 | -0.657 |
| Bibs02 | -0.901 | -0.012 |
| Bibs02c | -0.203 | 0.055 |
| BL6 | 0.712 | -0.05 |
| BL6a | 0.089 | -0.161 |
| BXD01 | 0.428 | 0.0 |
| BXD010 | -0.781 | -0.132 |
| BXD011 | 0.235 | -0.14 |
| BXD03 | 0.197 | -0.582 |
| BXD04 | 0.826 | -0.058 |
| BXD05 | 0.525 | -0.733 |
| BXD06 | 0.031 | 0.225 |
| BXD07 | 0.557 | 0.044 |
| BXD08 | 0.465 | -0.036 |
| BXD09 | -0.218 | -0.605 |
| CAST | 0.566 | 0.073 |
| CCcont | 0.195 | -0.23 |
| DS01 | 0.296 | -0.192 |
| DS02 | 0.147 | 0.057 |
| DS04 | 0.358 | 0.159 |
| DS0c | 0.347 | -0.402 |
| GP01 | -1.157 | -0.28 |
| GP02 | -0.877 | -1.456 |
| GP0c | -0.753 | -0.241 |
| NOD | 0.039 | -0.47 |
| NZO | -1.503 | -0.897 |
| PWK | -0.215 | -0.23 |
| H37Rv_KO_CtpC | -1.662 | -0.011 |
| H37Rv_KO_CtpD | 0.264 | 0.185 |
| H37Rv_KO_Rv1272 | -0.317 | -1.097 |
| H37Rv_KO_SugABC | -0.969 | -0.102 |
| H37Rv_KO_MbtN | -0.706 | -0.136 |
| Trans05 | -0.284 | -0.097 |
| macrophage_unactivated | 1.925 | 0.253 |
| IL1 | 0.406 | -0.249 |
| Rapamycin | 1.178 | 0.061 |
| Tcell | -0.147 | -0.528 |
| GMCSF | 0.689 | 0.528 |
| IFNab | 0.29 | -0.094 |
| IFNg | 1.267 | 0.214 |
| IFNg_GMCSF1 | 3.02 | 0.657 |
| Rv1432_day32 | -0.222 | 0.609 |
| Rv1565c_day32 | -1.579 | 0.316 |
| secA2_input | -1.105 | 0.322 |
| delta_Rv3594 | -1.444 | -0.835 |
| delta_Rv3717 | -0.789 | -1.226 |
| delta_Rv3811 | -1.022 | -1.692 |
| delta_Rv0954 | 0.15 | -0.444 |
| PonA1 | -0.668 | -0.422 |
| EccD1_KO | -0.141 | 0.763 |
| EspI_KO | 0.0 | 0.827 |
| PE35_KO | 0.216 | 0.131 |
| PPE68_KO | 0.186 | -0.304 |
| glycerol2 | -0.129 | 0.077 |
| lignocerate | 0.0 | 0.144 |
| oleate | -1.602 | 0.578 |
| phosphatidylcholine | -0.384 | 0.165 |
| acetate | 0.69 | 0.281 |
| glucAc | 0.868 | 0.085 |
| Rv0950ko | -0.292 | -0.305 |
| Rv1096ko | 0.407 | 0.866 |
| Rv3684ko | -0.183 | 1.133 |
| delta_otsA_trehalose | -0.138 | -0.192 |