Top 10 genes with highest correlation to Rv0740/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2644c/- | (cc=0.5214) | info on Rv2644c/- |
| Rv1574/- | (cc=0.5195) | info on Rv1574/- |
| Rv0584/- | (cc=0.4592) | info on Rv0584/- |
| Rv2848c/cobB | (cc=0.4519) | info on Rv2848c/cobB |
| Rv3175/- | (cc=0.4435) | info on Rv3175/- |
| Rv0926c/- | (cc=0.4291) | info on Rv0926c/- |
| Rv0902c/prrB | (cc=0.427) | info on Rv0902c/prrB |
| Rv0601c/- | (cc=0.4226) | info on Rv0601c/- |
| Rv0204c/- | (cc=0.418) | info on Rv0204c/- |
| Rv2901c/- | (cc=0.4103) | info on Rv2901c/- |
Correlation of Rv0740/- with Rv0902c/prrB
Normalized LFCs for Rv0740/-:
(description and provenance of datasets)
| Rv0740/- | Rv0902c/prrB | |
| Fe_supp_jason_reseq | 0.069 | 1.725 |
| low_pH_jason_reseq | 1.802 | -0.345 |
| NO_jason_reseq | 0.774 | -0.263 |
| B6_jason_reseq | 1.02 | 0.538 |
| MHCII_jason_reseq | 0.233 | 1.068 |
| Isoniazid02 | 0.989 | 0.383 |
| Rifampicin4 | 0.087 | 0.0 |
| Ethambutol3 | 1.16 | 2.432 |
| Meropenem3 | 0.688 | 0.0 |
| Vancomycin16 | 0.17 | 0.366 |
| Rv2680_day32 | -1.013 | -0.33 |
| H37Rv_KO_MarP | -0.027 | -0.476 |
| hypoxia_3wks | -1.854 | -0.53 |
| hypoxia_6wks | -1.063 | -1.05 |
| glycerol | -1.09 | -0.976 |
| cholesterol | -0.158 | -1.359 |
| AJ | -0.345 | -0.728 |
| Bibs02 | -0.901 | 1.139 |
| Bibs02c | -0.203 | 0.747 |
| BL6 | 0.712 | -0.955 |
| BL6a | 0.089 | 0.653 |
| BXD01 | 0.428 | -0.218 |
| BXD010 | -0.781 | -1.201 |
| BXD011 | 0.235 | 1.041 |
| BXD03 | 0.197 | -0.109 |
| BXD04 | 0.826 | -0.264 |
| BXD05 | 0.525 | 1.3 |
| BXD06 | 0.031 | 0.888 |
| BXD07 | 0.557 | 0.0 |
| BXD08 | 0.465 | 0.321 |
| BXD09 | -0.218 | 0.053 |
| CAST | 0.566 | -1.26 |
| CCcont | 0.195 | 0.574 |
| DS01 | 0.296 | 0.496 |
| DS02 | 0.147 | -0.922 |
| DS04 | 0.358 | -0.937 |
| DS0c | 0.347 | -0.68 |
| GP01 | -1.157 | -0.837 |
| GP02 | -0.877 | -0.705 |
| GP0c | -0.753 | -0.218 |
| NOD | 0.039 | -0.825 |
| NZO | -1.503 | -1.871 |
| PWK | -0.215 | -1.073 |
| H37Rv_KO_CtpC | -1.662 | -1.686 |
| H37Rv_KO_CtpD | 0.264 | -1.188 |
| H37Rv_KO_Rv1272 | -0.317 | 0.25 |
| H37Rv_KO_SugABC | -0.969 | 0.208 |
| H37Rv_KO_MbtN | -0.706 | -0.708 |
| Trans05 | -0.284 | 0.354 |
| macrophage_unactivated | 1.925 | 0.751 |
| IL1 | 0.406 | -0.463 |
| Rapamycin | 1.178 | 1.439 |
| Tcell | -0.147 | 0.567 |
| GMCSF | 0.689 | -0.752 |
| IFNab | 0.29 | 0.323 |
| IFNg | 1.267 | 1.034 |
| IFNg_GMCSF1 | 3.02 | 2.027 |
| Rv1432_day32 | -0.222 | 0.0 |
| Rv1565c_day32 | -1.579 | 0.0 |
| secA2_input | -1.105 | -1.631 |
| delta_Rv3594 | -1.444 | -1.086 |
| delta_Rv3717 | -0.789 | -2.326 |
| delta_Rv3811 | -1.022 | -0.697 |
| delta_Rv0954 | 0.15 | -0.403 |
| PonA1 | -0.668 | -0.249 |
| EccD1_KO | -0.141 | -0.201 |
| EspI_KO | 0.0 | -2.219 |
| PE35_KO | 0.216 | 0.172 |
| PPE68_KO | 0.186 | 0.189 |
| glycerol2 | -0.129 | -0.167 |
| lignocerate | 0.0 | -0.96 |
| oleate | -1.602 | 0.052 |
| phosphatidylcholine | -0.384 | -0.69 |
| acetate | 0.69 | -1.792 |
| glucAc | 0.868 | -1.199 |
| Rv0950ko | -0.292 | 0.669 |
| Rv1096ko | 0.407 | 1.764 |
| Rv3684ko | -0.183 | 0.727 |
| delta_otsA_trehalose | -0.138 | -0.245 |