Top 10 genes with highest correlation to Rv0740/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2644c/- | (cc=0.5214) | info on Rv2644c/- |
| Rv1574/- | (cc=0.5195) | info on Rv1574/- |
| Rv0584/- | (cc=0.4592) | info on Rv0584/- |
| Rv2848c/cobB | (cc=0.4519) | info on Rv2848c/cobB |
| Rv3175/- | (cc=0.4435) | info on Rv3175/- |
| Rv0926c/- | (cc=0.4291) | info on Rv0926c/- |
| Rv0902c/prrB | (cc=0.427) | info on Rv0902c/prrB |
| Rv0601c/- | (cc=0.4226) | info on Rv0601c/- |
| Rv0204c/- | (cc=0.418) | info on Rv0204c/- |
| Rv2901c/- | (cc=0.4103) | info on Rv2901c/- |
Correlation of Rv0740/- with Rv2644c/-
Normalized LFCs for Rv0740/-:
(description and provenance of datasets)
| Rv0740/- | Rv2644c/- | |
| Fe_supp_jason_reseq | 0.069 | 1.624 |
| low_pH_jason_reseq | 1.802 | 0.99 |
| NO_jason_reseq | 0.774 | 0.793 |
| B6_jason_reseq | 1.02 | 0.809 |
| MHCII_jason_reseq | 0.233 | 1.643 |
| Isoniazid02 | 0.989 | -0.351 |
| Rifampicin4 | 0.087 | 0.493 |
| Ethambutol3 | 1.16 | 1.667 |
| Meropenem3 | 0.688 | -0.121 |
| Vancomycin16 | 0.17 | 0.284 |
| Rv2680_day32 | -1.013 | -1.817 |
| H37Rv_KO_MarP | -0.027 | -0.107 |
| hypoxia_3wks | -1.854 | -1.18 |
| hypoxia_6wks | -1.063 | -0.593 |
| glycerol | -1.09 | -1.912 |
| cholesterol | -0.158 | -0.064 |
| AJ | -0.345 | 0.175 |
| Bibs02 | -0.901 | -0.132 |
| Bibs02c | -0.203 | 0.158 |
| BL6 | 0.712 | 0.83 |
| BL6a | 0.089 | -0.607 |
| BXD01 | 0.428 | 0.05 |
| BXD010 | -0.781 | -0.647 |
| BXD011 | 0.235 | -0.616 |
| BXD03 | 0.197 | -0.702 |
| BXD04 | 0.826 | -0.772 |
| BXD05 | 0.525 | -0.605 |
| BXD06 | 0.031 | -0.213 |
| BXD07 | 0.557 | -1.09 |
| BXD08 | 0.465 | -1.085 |
| BXD09 | -0.218 | -0.398 |
| CAST | 0.566 | 0.923 |
| CCcont | 0.195 | -0.194 |
| DS01 | 0.296 | 0.467 |
| DS02 | 0.147 | 1.115 |
| DS04 | 0.358 | 1.488 |
| DS0c | 0.347 | 0.925 |
| GP01 | -1.157 | -0.32 |
| GP02 | -0.877 | -0.753 |
| GP0c | -0.753 | -0.075 |
| NOD | 0.039 | 0.958 |
| NZO | -1.503 | 0.769 |
| PWK | -0.215 | 0.402 |
| H37Rv_KO_CtpC | -1.662 | -1.404 |
| H37Rv_KO_CtpD | 0.264 | 0.175 |
| H37Rv_KO_Rv1272 | -0.317 | -1.232 |
| H37Rv_KO_SugABC | -0.969 | -2.224 |
| H37Rv_KO_MbtN | -0.706 | -0.234 |
| Trans05 | -0.284 | -1.029 |
| macrophage_unactivated | 1.925 | 0.297 |
| IL1 | 0.406 | -0.205 |
| Rapamycin | 1.178 | -0.276 |
| Tcell | -0.147 | -0.394 |
| GMCSF | 0.689 | 0.525 |
| IFNab | 0.29 | 0.0 |
| IFNg | 1.267 | 0.0 |
| IFNg_GMCSF1 | 3.02 | 0.38 |
| Rv1432_day32 | -0.222 | -0.541 |
| Rv1565c_day32 | -1.579 | -0.818 |
| secA2_input | -1.105 | -1.288 |
| delta_Rv3594 | -1.444 | -2.276 |
| delta_Rv3717 | -0.789 | -1.793 |
| delta_Rv3811 | -1.022 | -1.728 |
| delta_Rv0954 | 0.15 | -1.593 |
| PonA1 | -0.668 | -1.322 |
| EccD1_KO | -0.141 | 0.829 |
| EspI_KO | 0.0 | -0.148 |
| PE35_KO | 0.216 | -0.05 |
| PPE68_KO | 0.186 | 0.71 |
| glycerol2 | -0.129 | 0.336 |
| lignocerate | 0.0 | 1.37 |
| oleate | -1.602 | -1.799 |
| phosphatidylcholine | -0.384 | 0.623 |
| acetate | 0.69 | 1.12 |
| glucAc | 0.868 | 1.148 |
| Rv0950ko | -0.292 | 0.911 |
| Rv1096ko | 0.407 | -0.368 |
| Rv3684ko | -0.183 | -0.521 |
| delta_otsA_trehalose | -0.138 | -0.11 |