Top 10 genes with highest correlation to Rv0691A/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0841/- | (cc=0.5986) | info on Rv0841/- |
| Rv0595c/vapC4 | (cc=0.5811) | info on Rv0595c/vapC4 |
| Rv0692/- | (cc=0.5473) | info on Rv0692/- |
| Rv1999c/- | (cc=0.5166) | info on Rv1999c/- |
| Rv3439c/- | (cc=0.5003) | info on Rv3439c/- |
| Rv0433/- | (cc=0.4969) | info on Rv0433/- |
| Rv2405/- | (cc=0.4941) | info on Rv2405/- |
| Rv2727c/miaA | (cc=0.4909) | info on Rv2727c/miaA |
| Rv3703c/- | (cc=0.488) | info on Rv3703c/- |
| Rv3874/esxB | (cc=0.4815) | info on Rv3874/esxB |
Correlation of Rv0691A/- with Rv3874/esxB
Normalized LFCs for Rv0691A/-:
(description and provenance of datasets)
| Rv0691A/- | Rv3874/esxB | |
| Fe_supp_jason_reseq | 1.449 | 2.171 |
| low_pH_jason_reseq | -1.188 | 0.895 |
| NO_jason_reseq | 0.0 | 2.221 |
| B6_jason_reseq | 1.554 | -1.502 |
| MHCII_jason_reseq | 0.545 | -0.667 |
| Isoniazid02 | 0.084 | -0.348 |
| Rifampicin4 | 0.344 | -0.847 |
| Ethambutol3 | 0.326 | -0.075 |
| Meropenem3 | 0.476 | 0.043 |
| Vancomycin16 | 0.992 | -0.634 |
| Rv2680_day32 | 0.0 | -1.662 |
| H37Rv_KO_MarP | -0.243 | -0.052 |
| hypoxia_3wks | -0.678 | 1.073 |
| hypoxia_6wks | 1.733 | 1.09 |
| glycerol | -0.023 | 0.162 |
| cholesterol | -2.556 | 0.033 |
| AJ | 0.077 | -4.809 |
| Bibs02 | -4.059 | -5.016 |
| Bibs02c | -2.176 | -3.265 |
| BL6 | -2.901 | -2.901 |
| BL6a | -2.87 | -3.801 |
| BXD01 | -3.021 | -2.221 |
| BXD010 | -2.971 | -3.513 |
| BXD011 | -1.044 | -2.712 |
| BXD03 | -3.137 | -3.452 |
| BXD04 | -1.684 | -2.497 |
| BXD05 | -2.987 | -2.1 |
| BXD06 | -2.441 | -3.096 |
| BXD07 | -2.443 | -3.535 |
| BXD08 | -3.085 | -3.649 |
| BXD09 | -3.26 | -3.587 |
| CAST | -2.396 | -5.342 |
| CCcont | -2.233 | -0.34 |
| DS01 | -2.057 | -3.119 |
| DS02 | 0.733 | -1.747 |
| DS04 | -0.441 | -3.384 |
| DS0c | -1.383 | -4.885 |
| GP01 | 0.837 | -2.438 |
| GP02 | -0.584 | -2.283 |
| GP0c | 1.651 | -1.553 |
| NOD | -2.203 | -4.107 |
| NZO | -1.313 | -5.092 |
| PWK | -0.186 | -4.691 |
| H37Rv_KO_CtpC | -3.458 | -1.903 |
| H37Rv_KO_CtpD | 0.448 | 0.458 |
| H37Rv_KO_Rv1272 | -0.899 | -1.826 |
| H37Rv_KO_SugABC | -2.298 | -0.313 |
| H37Rv_KO_MbtN | -2.108 | -1.541 |
| Trans05 | 0.677 | -1.797 |
| macrophage_unactivated | 2.273 | -2.456 |
| IL1 | 0.475 | -2.308 |
| Rapamycin | -0.267 | 0.353 |
| Tcell | -0.59 | -2.792 |
| GMCSF | -1.658 | -1.486 |
| IFNab | -0.263 | 0.133 |
| IFNg | -2.047 | -1.446 |
| IFNg_GMCSF1 | -0.569 | -2.13 |
| Rv1432_day32 | -0.155 | -2.542 |
| Rv1565c_day32 | 0.0 | -2.402 |
| secA2_input | -2.376 | 0.407 |
| delta_Rv3594 | 0.453 | -0.84 |
| delta_Rv3717 | 0.593 | -0.651 |
| delta_Rv3811 | 0.781 | -0.816 |
| delta_Rv0954 | 1.156 | -0.499 |
| PonA1 | 2.278 | -2.116 |
| EccD1_KO | -1.901 | -0.533 |
| EspI_KO | -1.968 | -2.564 |
| PE35_KO | -2.08 | -1.861 |
| PPE68_KO | -1.648 | -1.939 |
| glycerol2 | 1.073 | 1.304 |
| lignocerate | 0.32 | 2.087 |
| oleate | 0.0 | -1.418 |
| phosphatidylcholine | 0.819 | 1.611 |
| acetate | 0.0 | 2.635 |
| glucAc | 1.367 | 2.324 |
| Rv0950ko | -0.241 | 0.398 |
| Rv1096ko | -0.7 | 0.736 |
| Rv3684ko | 1.028 | 0.291 |
| delta_otsA_trehalose | 0.742 | -0.079 |