Top 10 genes with highest correlation to Rv0691A/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv0841/- | (cc=0.5986) | info on Rv0841/- |
Rv0595c/vapC4 | (cc=0.5811) | info on Rv0595c/vapC4 |
Rv0692/- | (cc=0.5473) | info on Rv0692/- |
Rv1999c/- | (cc=0.5166) | info on Rv1999c/- |
Rv3439c/- | (cc=0.5003) | info on Rv3439c/- |
Rv0433/- | (cc=0.4969) | info on Rv0433/- |
Rv2405/- | (cc=0.4941) | info on Rv2405/- |
Rv2727c/miaA | (cc=0.4909) | info on Rv2727c/miaA |
Rv3703c/- | (cc=0.488) | info on Rv3703c/- |
Rv3874/esxB | (cc=0.4815) | info on Rv3874/esxB |
Correlation of Rv0691A/- with Rv3439c/-
Normalized LFCs for Rv0691A/-:
(description and provenance of datasets)
Rv0691A/- | Rv3439c/- | |
Fe_supp_jason_reseq | 1.449 | -0.661 |
low_pH_jason_reseq | -1.188 | -1.138 |
NO_jason_reseq | 0.0 | -0.41 |
B6_jason_reseq | 1.554 | 0.863 |
MHCII_jason_reseq | 0.545 | 0.712 |
Isoniazid02 | 0.084 | 0.49 |
Rifampicin4 | 0.344 | 0.501 |
Ethambutol3 | 0.326 | 0.216 |
Meropenem3 | 0.476 | 0.944 |
Vancomycin16 | 0.992 | 0.329 |
Rv2680_day32 | 0.0 | -0.131 |
H37Rv_KO_MarP | -0.243 | 0.008 |
hypoxia_3wks | -0.678 | 0.064 |
hypoxia_6wks | 1.733 | 0.416 |
glycerol | -0.023 | 0.831 |
cholesterol | -2.556 | -0.004 |
AJ | 0.077 | 0.35 |
Bibs02 | -4.059 | -0.852 |
Bibs02c | -2.176 | 0.596 |
BL6 | -2.901 | -0.167 |
BL6a | -2.87 | -0.258 |
BXD01 | -3.021 | -0.84 |
BXD010 | -2.971 | -0.482 |
BXD011 | -1.044 | -0.788 |
BXD03 | -3.137 | -0.476 |
BXD04 | -1.684 | -1.466 |
BXD05 | -2.987 | -0.633 |
BXD06 | -2.441 | -0.519 |
BXD07 | -2.443 | -0.991 |
BXD08 | -3.085 | -0.382 |
BXD09 | -3.26 | -0.506 |
CAST | -2.396 | -0.22 |
CCcont | -2.233 | -0.209 |
DS01 | -2.057 | 0.573 |
DS02 | 0.733 | 0.443 |
DS04 | -0.441 | -0.131 |
DS0c | -1.383 | 0.234 |
GP01 | 0.837 | 0.022 |
GP02 | -0.584 | -0.036 |
GP0c | 1.651 | -0.339 |
NOD | -2.203 | -0.739 |
NZO | -1.313 | 0.533 |
PWK | -0.186 | 0.507 |
H37Rv_KO_CtpC | -3.458 | -1.21 |
H37Rv_KO_CtpD | 0.448 | 0.156 |
H37Rv_KO_Rv1272 | -0.899 | -0.388 |
H37Rv_KO_SugABC | -2.298 | -1.238 |
H37Rv_KO_MbtN | -2.108 | -1.602 |
Trans05 | 0.677 | -0.711 |
macrophage_unactivated | 2.273 | -0.366 |
IL1 | 0.475 | -0.184 |
Rapamycin | -0.267 | 0.301 |
Tcell | -0.59 | -0.831 |
GMCSF | -1.658 | 0.584 |
IFNab | -0.263 | -0.284 |
IFNg | -2.047 | 0.04 |
IFNg_GMCSF1 | -0.569 | -0.452 |
Rv1432_day32 | -0.155 | 0.057 |
Rv1565c_day32 | 0.0 | 0.464 |
secA2_input | -2.376 | 0.299 |
delta_Rv3594 | 0.453 | 1.716 |
delta_Rv3717 | 0.593 | 1.287 |
delta_Rv3811 | 0.781 | 1.184 |
delta_Rv0954 | 1.156 | 2.106 |
PonA1 | 2.278 | 1.384 |
EccD1_KO | -1.901 | -0.141 |
EspI_KO | -1.968 | -0.106 |
PE35_KO | -2.08 | -0.403 |
PPE68_KO | -1.648 | -0.765 |
glycerol2 | 1.073 | 0.394 |
lignocerate | 0.32 | 0.43 |
oleate | 0.0 | -0.37 |
phosphatidylcholine | 0.819 | 0.09 |
acetate | 0.0 | -1.037 |
glucAc | 1.367 | -0.233 |
Rv0950ko | -0.241 | -0.112 |
Rv1096ko | -0.7 | 0.365 |
Rv3684ko | 1.028 | 0.039 |
delta_otsA_trehalose | 0.742 | 0.507 |