Top 10 genes with highest correlation to Rv0691A/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0841/- | (cc=0.5986) | info on Rv0841/- |
| Rv0595c/vapC4 | (cc=0.5811) | info on Rv0595c/vapC4 |
| Rv0692/- | (cc=0.5473) | info on Rv0692/- |
| Rv1999c/- | (cc=0.5166) | info on Rv1999c/- |
| Rv3439c/- | (cc=0.5003) | info on Rv3439c/- |
| Rv0433/- | (cc=0.4969) | info on Rv0433/- |
| Rv2405/- | (cc=0.4941) | info on Rv2405/- |
| Rv2727c/miaA | (cc=0.4909) | info on Rv2727c/miaA |
| Rv3703c/- | (cc=0.488) | info on Rv3703c/- |
| Rv3874/esxB | (cc=0.4815) | info on Rv3874/esxB |
Correlation of Rv0691A/- with Rv1999c/-
Normalized LFCs for Rv0691A/-:
(description and provenance of datasets)
| Rv0691A/- | Rv1999c/- | |
| Fe_supp_jason_reseq | 1.449 | 0.032 |
| low_pH_jason_reseq | -1.188 | -0.609 |
| NO_jason_reseq | 0.0 | 0.239 |
| B6_jason_reseq | 1.554 | -0.061 |
| MHCII_jason_reseq | 0.545 | 0.316 |
| Isoniazid02 | 0.084 | 0.188 |
| Rifampicin4 | 0.344 | 0.628 |
| Ethambutol3 | 0.326 | 0.17 |
| Meropenem3 | 0.476 | -0.29 |
| Vancomycin16 | 0.992 | 0.032 |
| Rv2680_day32 | 0.0 | 0.398 |
| H37Rv_KO_MarP | -0.243 | -0.042 |
| hypoxia_3wks | -0.678 | -0.227 |
| hypoxia_6wks | 1.733 | -0.397 |
| glycerol | -0.023 | -0.499 |
| cholesterol | -2.556 | -0.351 |
| AJ | 0.077 | -0.097 |
| Bibs02 | -4.059 | 0.007 |
| Bibs02c | -2.176 | -0.088 |
| BL6 | -2.901 | -0.925 |
| BL6a | -2.87 | -0.676 |
| BXD01 | -3.021 | -0.679 |
| BXD010 | -2.971 | -0.928 |
| BXD011 | -1.044 | -0.795 |
| BXD03 | -3.137 | -0.578 |
| BXD04 | -1.684 | -0.7 |
| BXD05 | -2.987 | -1.079 |
| BXD06 | -2.441 | -0.89 |
| BXD07 | -2.443 | -0.664 |
| BXD08 | -3.085 | -0.867 |
| BXD09 | -3.26 | -0.907 |
| CAST | -2.396 | -0.35 |
| CCcont | -2.233 | -0.974 |
| DS01 | -2.057 | 0.053 |
| DS02 | 0.733 | 0.118 |
| DS04 | -0.441 | 0.333 |
| DS0c | -1.383 | -0.515 |
| GP01 | 0.837 | 0.218 |
| GP02 | -0.584 | -0.615 |
| GP0c | 1.651 | -0.365 |
| NOD | -2.203 | -0.202 |
| NZO | -1.313 | -0.228 |
| PWK | -0.186 | -0.359 |
| H37Rv_KO_CtpC | -3.458 | -1.177 |
| H37Rv_KO_CtpD | 0.448 | -0.724 |
| H37Rv_KO_Rv1272 | -0.899 | -0.021 |
| H37Rv_KO_SugABC | -2.298 | -0.338 |
| H37Rv_KO_MbtN | -2.108 | -0.29 |
| Trans05 | 0.677 | -0.035 |
| macrophage_unactivated | 2.273 | -0.038 |
| IL1 | 0.475 | -0.522 |
| Rapamycin | -0.267 | -0.623 |
| Tcell | -0.59 | -0.238 |
| GMCSF | -1.658 | 0.356 |
| IFNab | -0.263 | -0.78 |
| IFNg | -2.047 | -0.505 |
| IFNg_GMCSF1 | -0.569 | 0.072 |
| Rv1432_day32 | -0.155 | 0.248 |
| Rv1565c_day32 | 0.0 | 0.122 |
| secA2_input | -2.376 | -0.374 |
| delta_Rv3594 | 0.453 | -0.021 |
| delta_Rv3717 | 0.593 | 0.216 |
| delta_Rv3811 | 0.781 | 0.326 |
| delta_Rv0954 | 1.156 | -0.335 |
| PonA1 | 2.278 | -0.308 |
| EccD1_KO | -1.901 | 0.296 |
| EspI_KO | -1.968 | -0.088 |
| PE35_KO | -2.08 | 0.63 |
| PPE68_KO | -1.648 | 0.31 |
| glycerol2 | 1.073 | 0.765 |
| lignocerate | 0.32 | 0.848 |
| oleate | 0.0 | 0.119 |
| phosphatidylcholine | 0.819 | 0.899 |
| acetate | 0.0 | 0.648 |
| glucAc | 1.367 | 0.925 |
| Rv0950ko | -0.241 | 0.199 |
| Rv1096ko | -0.7 | -0.13 |
| Rv3684ko | 1.028 | 0.445 |
| delta_otsA_trehalose | 0.742 | 0.475 |