Top 10 genes with highest correlation to Rv0691A/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0841/- | (cc=0.5986) | info on Rv0841/- |
| Rv0595c/vapC4 | (cc=0.5811) | info on Rv0595c/vapC4 |
| Rv0692/- | (cc=0.5473) | info on Rv0692/- |
| Rv1999c/- | (cc=0.5166) | info on Rv1999c/- |
| Rv3439c/- | (cc=0.5003) | info on Rv3439c/- |
| Rv0433/- | (cc=0.4969) | info on Rv0433/- |
| Rv2405/- | (cc=0.4941) | info on Rv2405/- |
| Rv2727c/miaA | (cc=0.4909) | info on Rv2727c/miaA |
| Rv3703c/- | (cc=0.488) | info on Rv3703c/- |
| Rv3874/esxB | (cc=0.4815) | info on Rv3874/esxB |
Correlation of Rv0691A/- with Rv3703c/-
Normalized LFCs for Rv0691A/-:
(description and provenance of datasets)
| Rv0691A/- | Rv3703c/- | |
| Fe_supp_jason_reseq | 1.449 | -0.893 |
| low_pH_jason_reseq | -1.188 | -0.622 |
| NO_jason_reseq | 0.0 | -0.189 |
| B6_jason_reseq | 1.554 | -0.733 |
| MHCII_jason_reseq | 0.545 | -0.868 |
| Isoniazid02 | 0.084 | 0.058 |
| Rifampicin4 | 0.344 | -0.111 |
| Ethambutol3 | 0.326 | -0.181 |
| Meropenem3 | 0.476 | -0.392 |
| Vancomycin16 | 0.992 | -0.22 |
| Rv2680_day32 | 0.0 | -0.954 |
| H37Rv_KO_MarP | -0.243 | 0.484 |
| hypoxia_3wks | -0.678 | -1.021 |
| hypoxia_6wks | 1.733 | -0.58 |
| glycerol | -0.023 | -0.44 |
| cholesterol | -2.556 | -0.692 |
| AJ | 0.077 | -0.782 |
| Bibs02 | -4.059 | -0.817 |
| Bibs02c | -2.176 | -2.052 |
| BL6 | -2.901 | -0.502 |
| BL6a | -2.87 | -1.725 |
| BXD01 | -3.021 | -1.046 |
| BXD010 | -2.971 | -0.934 |
| BXD011 | -1.044 | -0.929 |
| BXD03 | -3.137 | -1.057 |
| BXD04 | -1.684 | -1.02 |
| BXD05 | -2.987 | -0.633 |
| BXD06 | -2.441 | -0.833 |
| BXD07 | -2.443 | -1.569 |
| BXD08 | -3.085 | -0.747 |
| BXD09 | -3.26 | -1.307 |
| CAST | -2.396 | -0.157 |
| CCcont | -2.233 | -1.03 |
| DS01 | -2.057 | -0.984 |
| DS02 | 0.733 | -1.128 |
| DS04 | -0.441 | -1.21 |
| DS0c | -1.383 | -0.715 |
| GP01 | 0.837 | 0.109 |
| GP02 | -0.584 | -0.744 |
| GP0c | 1.651 | 0.54 |
| NOD | -2.203 | 0.649 |
| NZO | -1.313 | -0.985 |
| PWK | -0.186 | -0.176 |
| H37Rv_KO_CtpC | -3.458 | -0.558 |
| H37Rv_KO_CtpD | 0.448 | -0.556 |
| H37Rv_KO_Rv1272 | -0.899 | -1.057 |
| H37Rv_KO_SugABC | -2.298 | -0.168 |
| H37Rv_KO_MbtN | -2.108 | 0.575 |
| Trans05 | 0.677 | -1.007 |
| macrophage_unactivated | 2.273 | 0.322 |
| IL1 | 0.475 | 0.0 |
| Rapamycin | -0.267 | 0.0 |
| Tcell | -0.59 | -0.036 |
| GMCSF | -1.658 | -0.029 |
| IFNab | -0.263 | 0.063 |
| IFNg | -2.047 | 0.112 |
| IFNg_GMCSF1 | -0.569 | -0.204 |
| Rv1432_day32 | -0.155 | 0.012 |
| Rv1565c_day32 | 0.0 | -0.463 |
| secA2_input | -2.376 | 0.532 |
| delta_Rv3594 | 0.453 | 0.577 |
| delta_Rv3717 | 0.593 | 0.641 |
| delta_Rv3811 | 0.781 | 0.935 |
| delta_Rv0954 | 1.156 | 1.023 |
| PonA1 | 2.278 | 1.393 |
| EccD1_KO | -1.901 | -0.878 |
| EspI_KO | -1.968 | -0.673 |
| PE35_KO | -2.08 | -0.621 |
| PPE68_KO | -1.648 | -1.597 |
| glycerol2 | 1.073 | 0.528 |
| lignocerate | 0.32 | 0.686 |
| oleate | 0.0 | 1.104 |
| phosphatidylcholine | 0.819 | 0.384 |
| acetate | 0.0 | 0.961 |
| glucAc | 1.367 | 0.67 |
| Rv0950ko | -0.241 | 0.594 |
| Rv1096ko | -0.7 | 0.651 |
| Rv3684ko | 1.028 | 0.318 |
| delta_otsA_trehalose | 0.742 | 0.151 |