Top 10 genes with highest correlation to Rv0691A/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0841/- | (cc=0.5986) | info on Rv0841/- |
| Rv0595c/vapC4 | (cc=0.5811) | info on Rv0595c/vapC4 |
| Rv0692/- | (cc=0.5473) | info on Rv0692/- |
| Rv1999c/- | (cc=0.5166) | info on Rv1999c/- |
| Rv3439c/- | (cc=0.5003) | info on Rv3439c/- |
| Rv0433/- | (cc=0.4969) | info on Rv0433/- |
| Rv2405/- | (cc=0.4941) | info on Rv2405/- |
| Rv2727c/miaA | (cc=0.4909) | info on Rv2727c/miaA |
| Rv3703c/- | (cc=0.488) | info on Rv3703c/- |
| Rv3874/esxB | (cc=0.4815) | info on Rv3874/esxB |
Correlation of Rv0691A/- with Rv0595c/vapC4
Normalized LFCs for Rv0691A/-:
(description and provenance of datasets)
| Rv0691A/- | Rv0595c/vapC4 | |
| Fe_supp_jason_reseq | 1.449 | 0.952 |
| low_pH_jason_reseq | -1.188 | 0.918 |
| NO_jason_reseq | 0.0 | 0.522 |
| B6_jason_reseq | 1.554 | 1.072 |
| MHCII_jason_reseq | 0.545 | -0.694 |
| Isoniazid02 | 0.084 | 0.073 |
| Rifampicin4 | 0.344 | 0.417 |
| Ethambutol3 | 0.326 | 0.579 |
| Meropenem3 | 0.476 | 0.57 |
| Vancomycin16 | 0.992 | 0.645 |
| Rv2680_day32 | 0.0 | 1.429 |
| H37Rv_KO_MarP | -0.243 | 0.415 |
| hypoxia_3wks | -0.678 | -0.299 |
| hypoxia_6wks | 1.733 | -0.319 |
| glycerol | -0.023 | -0.091 |
| cholesterol | -2.556 | -0.049 |
| AJ | 0.077 | 0.114 |
| Bibs02 | -4.059 | -0.607 |
| Bibs02c | -2.176 | -0.834 |
| BL6 | -2.901 | -1.475 |
| BL6a | -2.87 | -2.101 |
| BXD01 | -3.021 | -2.684 |
| BXD010 | -2.971 | -0.361 |
| BXD011 | -1.044 | -1.833 |
| BXD03 | -3.137 | -1.16 |
| BXD04 | -1.684 | -1.763 |
| BXD05 | -2.987 | -1.799 |
| BXD06 | -2.441 | -2.013 |
| BXD07 | -2.443 | -1.722 |
| BXD08 | -3.085 | -1.214 |
| BXD09 | -3.26 | -1.599 |
| CAST | -2.396 | -0.023 |
| CCcont | -2.233 | -1.464 |
| DS01 | -2.057 | -0.157 |
| DS02 | 0.733 | -0.307 |
| DS04 | -0.441 | -1.62 |
| DS0c | -1.383 | -1.315 |
| GP01 | 0.837 | 0.821 |
| GP02 | -0.584 | -0.134 |
| GP0c | 1.651 | 0.056 |
| NOD | -2.203 | -0.343 |
| NZO | -1.313 | -0.376 |
| PWK | -0.186 | -0.277 |
| H37Rv_KO_CtpC | -3.458 | -1.097 |
| H37Rv_KO_CtpD | 0.448 | 0.059 |
| H37Rv_KO_Rv1272 | -0.899 | -0.872 |
| H37Rv_KO_SugABC | -2.298 | 0.347 |
| H37Rv_KO_MbtN | -2.108 | -1.511 |
| Trans05 | 0.677 | 0.223 |
| macrophage_unactivated | 2.273 | -0.467 |
| IL1 | 0.475 | -1.486 |
| Rapamycin | -0.267 | -0.034 |
| Tcell | -0.59 | -0.036 |
| GMCSF | -1.658 | 0.277 |
| IFNab | -0.263 | -0.203 |
| IFNg | -2.047 | -0.949 |
| IFNg_GMCSF1 | -0.569 | 0.0 |
| Rv1432_day32 | -0.155 | -0.838 |
| Rv1565c_day32 | 0.0 | -0.098 |
| secA2_input | -2.376 | 0.585 |
| delta_Rv3594 | 0.453 | 0.515 |
| delta_Rv3717 | 0.593 | 0.305 |
| delta_Rv3811 | 0.781 | 0.333 |
| delta_Rv0954 | 1.156 | 0.509 |
| PonA1 | 2.278 | 0.14 |
| EccD1_KO | -1.901 | -0.957 |
| EspI_KO | -1.968 | 0.399 |
| PE35_KO | -2.08 | -0.023 |
| PPE68_KO | -1.648 | -0.813 |
| glycerol2 | 1.073 | 0.0 |
| lignocerate | 0.32 | 0.198 |
| oleate | 0.0 | 0.421 |
| phosphatidylcholine | 0.819 | -0.387 |
| acetate | 0.0 | 0.514 |
| glucAc | 1.367 | 0.345 |
| Rv0950ko | -0.241 | -0.244 |
| Rv1096ko | -0.7 | 0.477 |
| Rv3684ko | 1.028 | 0.517 |
| delta_otsA_trehalose | 0.742 | 1.251 |