Top 10 genes with highest correlation to Rv0687/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2014/- | (cc=0.6039) | info on Rv2014/- |
| Rv1956/higA | (cc=0.5553) | info on Rv1956/higA |
| Rv0433/- | (cc=0.5512) | info on Rv0433/- |
| Rv0119/fadD7 | (cc=0.5434) | info on Rv0119/fadD7 |
| Rv2902c/rnhB | (cc=0.5391) | info on Rv2902c/rnhB |
| Rv1992c/ctpG | (cc=0.5315) | info on Rv1992c/ctpG |
| Rv0325/- | (cc=0.5266) | info on Rv0325/- |
| Rv3037c/- | (cc=0.5224) | info on Rv3037c/- |
| Rv2323c/- | (cc=0.5121) | info on Rv2323c/- |
| Rv2036/- | (cc=0.5059) | info on Rv2036/- |
Correlation of Rv0687/- with Rv3037c/-
Normalized LFCs for Rv0687/-:
(description and provenance of datasets)
| Rv0687/- | Rv3037c/- | |
| Fe_supp_jason_reseq | -1.187 | -0.789 |
| low_pH_jason_reseq | 0.805 | -0.269 |
| NO_jason_reseq | 0.412 | 0.924 |
| B6_jason_reseq | -0.312 | 0.089 |
| MHCII_jason_reseq | -0.311 | -0.464 |
| Isoniazid02 | 1.116 | 1.477 |
| Rifampicin4 | 1.083 | 0.671 |
| Ethambutol3 | 1.198 | 0.248 |
| Meropenem3 | 3.163 | 1.241 |
| Vancomycin16 | 1.061 | 0.263 |
| Rv2680_day32 | -0.637 | 0.011 |
| H37Rv_KO_MarP | -0.189 | 0.693 |
| hypoxia_3wks | -0.311 | -0.072 |
| hypoxia_6wks | 0.867 | -0.722 |
| glycerol | -0.764 | 0.105 |
| cholesterol | -0.391 | -0.073 |
| AJ | 0.316 | -0.755 |
| Bibs02 | -0.624 | -0.23 |
| Bibs02c | -1.381 | -0.626 |
| BL6 | -0.89 | -1.798 |
| BL6a | -1.075 | -1.042 |
| BXD01 | -0.518 | -1.288 |
| BXD010 | -1.907 | -1.181 |
| BXD011 | -1.009 | 0.505 |
| BXD03 | -1.15 | -2.486 |
| BXD04 | -1.209 | -0.827 |
| BXD05 | -1.271 | -1.241 |
| BXD06 | -1.261 | -0.873 |
| BXD07 | -0.847 | -0.791 |
| BXD08 | -0.091 | -1.238 |
| BXD09 | -1.374 | -1.461 |
| CAST | 0.177 | -0.34 |
| CCcont | -0.403 | -1.418 |
| DS01 | -0.298 | 0.072 |
| DS02 | -0.443 | 0.252 |
| DS04 | 0.538 | -0.401 |
| DS0c | 0.167 | -0.2 |
| GP01 | 0.0 | -1.794 |
| GP02 | -1.195 | -0.823 |
| GP0c | 0.677 | -1.286 |
| NOD | -1.219 | -0.719 |
| NZO | 0.201 | -0.659 |
| PWK | -0.026 | -1.044 |
| H37Rv_KO_CtpC | 0.164 | -0.076 |
| H37Rv_KO_CtpD | 0.942 | -0.81 |
| H37Rv_KO_Rv1272 | -0.221 | -0.221 |
| H37Rv_KO_SugABC | -0.583 | -0.721 |
| H37Rv_KO_MbtN | 0.164 | -0.33 |
| Trans05 | 0.513 | -0.148 |
| macrophage_unactivated | -1.61 | -2.093 |
| IL1 | -1.385 | -0.475 |
| Rapamycin | -1.841 | -0.957 |
| Tcell | -1.522 | -0.867 |
| GMCSF | -0.082 | -0.75 |
| IFNab | -1.542 | -0.562 |
| IFNg | -1.136 | 0.313 |
| IFNg_GMCSF1 | 0.371 | 0.346 |
| Rv1432_day32 | -0.661 | 0.249 |
| Rv1565c_day32 | 1.469 | 0.889 |
| secA2_input | 0.967 | 1.212 |
| delta_Rv3594 | 1.744 | 0.597 |
| delta_Rv3717 | 1.085 | 0.62 |
| delta_Rv3811 | 1.558 | 0.217 |
| delta_Rv0954 | 0.238 | 0.82 |
| PonA1 | 0.974 | 0.336 |
| EccD1_KO | -0.187 | 1.016 |
| EspI_KO | -0.625 | 0.856 |
| PE35_KO | -0.455 | 0.475 |
| PPE68_KO | -0.499 | -0.211 |
| glycerol2 | 0.635 | 0.315 |
| lignocerate | 0.061 | 0.582 |
| oleate | 0.912 | 0.319 |
| phosphatidylcholine | 0.326 | 1.301 |
| acetate | -0.266 | -0.055 |
| glucAc | 0.026 | -0.06 |
| Rv0950ko | -0.241 | 0.709 |
| Rv1096ko | -0.564 | 1.013 |
| Rv3684ko | -1.15 | 0.324 |
| delta_otsA_trehalose | 0.333 | 0.405 |