Top 10 genes with highest correlation to Rv0687/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2014/- | (cc=0.6039) | info on Rv2014/- |
| Rv1956/higA | (cc=0.5553) | info on Rv1956/higA |
| Rv0433/- | (cc=0.5512) | info on Rv0433/- |
| Rv0119/fadD7 | (cc=0.5434) | info on Rv0119/fadD7 |
| Rv2902c/rnhB | (cc=0.5391) | info on Rv2902c/rnhB |
| Rv1992c/ctpG | (cc=0.5315) | info on Rv1992c/ctpG |
| Rv0325/- | (cc=0.5266) | info on Rv0325/- |
| Rv3037c/- | (cc=0.5224) | info on Rv3037c/- |
| Rv2323c/- | (cc=0.5121) | info on Rv2323c/- |
| Rv2036/- | (cc=0.5059) | info on Rv2036/- |
Correlation of Rv0687/- with Rv1992c/ctpG
Normalized LFCs for Rv0687/-:
(description and provenance of datasets)
| Rv0687/- | Rv1992c/ctpG | |
| Fe_supp_jason_reseq | -1.187 | -0.123 |
| low_pH_jason_reseq | 0.805 | -0.356 |
| NO_jason_reseq | 0.412 | -0.452 |
| B6_jason_reseq | -0.312 | -0.546 |
| MHCII_jason_reseq | -0.311 | -0.501 |
| Isoniazid02 | 1.116 | 1.209 |
| Rifampicin4 | 1.083 | 0.525 |
| Ethambutol3 | 1.198 | 1.041 |
| Meropenem3 | 3.163 | 1.284 |
| Vancomycin16 | 1.061 | 0.647 |
| Rv2680_day32 | -0.637 | -0.526 |
| H37Rv_KO_MarP | -0.189 | 0.028 |
| hypoxia_3wks | -0.311 | 0.287 |
| hypoxia_6wks | 0.867 | -0.248 |
| glycerol | -0.764 | -0.238 |
| cholesterol | -0.391 | -0.419 |
| AJ | 0.316 | 0.079 |
| Bibs02 | -0.624 | 0.166 |
| Bibs02c | -1.381 | -0.073 |
| BL6 | -0.89 | -0.619 |
| BL6a | -1.075 | -0.263 |
| BXD01 | -0.518 | -0.355 |
| BXD010 | -1.907 | -1.141 |
| BXD011 | -1.009 | -0.362 |
| BXD03 | -1.15 | -0.588 |
| BXD04 | -1.209 | -0.022 |
| BXD05 | -1.271 | -0.287 |
| BXD06 | -1.261 | -0.417 |
| BXD07 | -0.847 | -0.666 |
| BXD08 | -0.091 | -0.298 |
| BXD09 | -1.374 | -0.695 |
| CAST | 0.177 | -0.654 |
| CCcont | -0.403 | -0.901 |
| DS01 | -0.298 | 0.11 |
| DS02 | -0.443 | 0.17 |
| DS04 | 0.538 | 0.399 |
| DS0c | 0.167 | 0.145 |
| GP01 | 0.0 | -0.291 |
| GP02 | -1.195 | 1.017 |
| GP0c | 0.677 | -0.236 |
| NOD | -1.219 | -0.319 |
| NZO | 0.201 | -0.178 |
| PWK | -0.026 | -0.212 |
| H37Rv_KO_CtpC | 0.164 | 0.034 |
| H37Rv_KO_CtpD | 0.942 | -0.211 |
| H37Rv_KO_Rv1272 | -0.221 | 0.07 |
| H37Rv_KO_SugABC | -0.583 | 0.135 |
| H37Rv_KO_MbtN | 0.164 | 0.522 |
| Trans05 | 0.513 | 0.065 |
| macrophage_unactivated | -1.61 | -0.123 |
| IL1 | -1.385 | -0.116 |
| Rapamycin | -1.841 | 0.184 |
| Tcell | -1.522 | -0.362 |
| GMCSF | -0.082 | 0.454 |
| IFNab | -1.542 | -0.212 |
| IFNg | -1.136 | -0.385 |
| IFNg_GMCSF1 | 0.371 | -0.245 |
| Rv1432_day32 | -0.661 | 0.117 |
| Rv1565c_day32 | 1.469 | 0.208 |
| secA2_input | 0.967 | -0.47 |
| delta_Rv3594 | 1.744 | 0.772 |
| delta_Rv3717 | 1.085 | 0.515 |
| delta_Rv3811 | 1.558 | 0.642 |
| delta_Rv0954 | 0.238 | 0.702 |
| PonA1 | 0.974 | 0.57 |
| EccD1_KO | -0.187 | 0.234 |
| EspI_KO | -0.625 | -0.034 |
| PE35_KO | -0.455 | 0.0 |
| PPE68_KO | -0.499 | -0.509 |
| glycerol2 | 0.635 | 0.042 |
| lignocerate | 0.061 | -0.262 |
| oleate | 0.912 | 0.407 |
| phosphatidylcholine | 0.326 | 0.178 |
| acetate | -0.266 | -0.898 |
| glucAc | 0.026 | -0.912 |
| Rv0950ko | -0.241 | 0.434 |
| Rv1096ko | -0.564 | -0.121 |
| Rv3684ko | -1.15 | -0.265 |
| delta_otsA_trehalose | 0.333 | -0.233 |