Top 10 genes with highest correlation to Rv0687/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2014/- | (cc=0.6039) | info on Rv2014/- |
| Rv1956/higA | (cc=0.5553) | info on Rv1956/higA |
| Rv0433/- | (cc=0.5512) | info on Rv0433/- |
| Rv0119/fadD7 | (cc=0.5434) | info on Rv0119/fadD7 |
| Rv2902c/rnhB | (cc=0.5391) | info on Rv2902c/rnhB |
| Rv1992c/ctpG | (cc=0.5315) | info on Rv1992c/ctpG |
| Rv0325/- | (cc=0.5266) | info on Rv0325/- |
| Rv3037c/- | (cc=0.5224) | info on Rv3037c/- |
| Rv2323c/- | (cc=0.5121) | info on Rv2323c/- |
| Rv2036/- | (cc=0.5059) | info on Rv2036/- |
Correlation of Rv0687/- with Rv2902c/rnhB
Normalized LFCs for Rv0687/-:
(description and provenance of datasets)
| Rv0687/- | Rv2902c/rnhB | |
| Fe_supp_jason_reseq | -1.187 | 0.393 |
| low_pH_jason_reseq | 0.805 | 0.806 |
| NO_jason_reseq | 0.412 | 1.239 |
| B6_jason_reseq | -0.312 | 1.308 |
| MHCII_jason_reseq | -0.311 | -0.026 |
| Isoniazid02 | 1.116 | 1.075 |
| Rifampicin4 | 1.083 | 0.769 |
| Ethambutol3 | 1.198 | 0.97 |
| Meropenem3 | 3.163 | 1.962 |
| Vancomycin16 | 1.061 | 0.47 |
| Rv2680_day32 | -0.637 | 0.93 |
| H37Rv_KO_MarP | -0.189 | -0.796 |
| hypoxia_3wks | -0.311 | 0.351 |
| hypoxia_6wks | 0.867 | 0.539 |
| glycerol | -0.764 | 0.301 |
| cholesterol | -0.391 | 0.068 |
| AJ | 0.316 | 0.553 |
| Bibs02 | -0.624 | 0.38 |
| Bibs02c | -1.381 | 0.109 |
| BL6 | -0.89 | -0.3 |
| BL6a | -1.075 | -0.436 |
| BXD01 | -0.518 | -1.098 |
| BXD010 | -1.907 | -0.29 |
| BXD011 | -1.009 | -0.358 |
| BXD03 | -1.15 | 0.071 |
| BXD04 | -1.209 | -1.043 |
| BXD05 | -1.271 | -0.369 |
| BXD06 | -1.261 | -0.12 |
| BXD07 | -0.847 | -0.679 |
| BXD08 | -0.091 | -0.365 |
| BXD09 | -1.374 | -0.738 |
| CAST | 0.177 | 0.269 |
| CCcont | -0.403 | -1.027 |
| DS01 | -0.298 | 0.263 |
| DS02 | -0.443 | 0.911 |
| DS04 | 0.538 | 0.131 |
| DS0c | 0.167 | 0.652 |
| GP01 | 0.0 | -1.102 |
| GP02 | -1.195 | 1.067 |
| GP0c | 0.677 | -0.26 |
| NOD | -1.219 | -0.228 |
| NZO | 0.201 | -0.829 |
| PWK | -0.026 | 0.303 |
| H37Rv_KO_CtpC | 0.164 | -1.133 |
| H37Rv_KO_CtpD | 0.942 | -0.304 |
| H37Rv_KO_Rv1272 | -0.221 | -0.778 |
| H37Rv_KO_SugABC | -0.583 | -1.451 |
| H37Rv_KO_MbtN | 0.164 | -0.42 |
| Trans05 | 0.513 | -0.377 |
| macrophage_unactivated | -1.61 | -0.556 |
| IL1 | -1.385 | -0.925 |
| Rapamycin | -1.841 | -0.801 |
| Tcell | -1.522 | 0.166 |
| GMCSF | -0.082 | -0.111 |
| IFNab | -1.542 | -0.983 |
| IFNg | -1.136 | -0.834 |
| IFNg_GMCSF1 | 0.371 | 0.223 |
| Rv1432_day32 | -0.661 | -0.175 |
| Rv1565c_day32 | 1.469 | 0.483 |
| secA2_input | 0.967 | 0.02 |
| delta_Rv3594 | 1.744 | 0.675 |
| delta_Rv3717 | 1.085 | 0.566 |
| delta_Rv3811 | 1.558 | 0.766 |
| delta_Rv0954 | 0.238 | 0.767 |
| PonA1 | 0.974 | 0.497 |
| EccD1_KO | -0.187 | -0.296 |
| EspI_KO | -0.625 | -0.713 |
| PE35_KO | -0.455 | -0.438 |
| PPE68_KO | -0.499 | -0.518 |
| glycerol2 | 0.635 | 0.185 |
| lignocerate | 0.061 | 0.0 |
| oleate | 0.912 | 0.859 |
| phosphatidylcholine | 0.326 | 0.536 |
| acetate | -0.266 | 0.161 |
| glucAc | 0.026 | 0.335 |
| Rv0950ko | -0.241 | -0.069 |
| Rv1096ko | -0.564 | -0.642 |
| Rv3684ko | -1.15 | 0.223 |
| delta_otsA_trehalose | 0.333 | 0.493 |