Top 10 genes with highest correlation to Rv0674/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1453/- | (cc=0.5891) | info on Rv1453/- |
| Rv0901/- | (cc=0.5708) | info on Rv0901/- |
| Rv0218/- | (cc=0.5667) | info on Rv0218/- |
| Rv3637/- | (cc=0.5633) | info on Rv3637/- |
| Rv3401/- | (cc=0.563) | info on Rv3401/- |
| Rv1181/pks4 | (cc=0.5386) | info on Rv1181/pks4 |
| Rv0233/nrdB | (cc=0.5312) | info on Rv0233/nrdB |
| Rv2915c/- | (cc=0.5309) | info on Rv2915c/- |
| Rv2867c/- | (cc=0.5286) | info on Rv2867c/- |
| Rv2974c/- | (cc=0.5188) | info on Rv2974c/- |
Correlation of Rv0674/- with Rv3401/-
Normalized LFCs for Rv0674/-:
(description and provenance of datasets)
| Rv0674/- | Rv3401/- | |
| Fe_supp_jason_reseq | -0.863 | 0.0 |
| low_pH_jason_reseq | -0.915 | -0.659 |
| NO_jason_reseq | 0.194 | -0.026 |
| B6_jason_reseq | 1.023 | 0.695 |
| MHCII_jason_reseq | 1.392 | 0.952 |
| Isoniazid02 | -0.108 | 0.383 |
| Rifampicin4 | 0.712 | 0.244 |
| Ethambutol3 | 1.031 | 0.72 |
| Meropenem3 | 0.642 | 1.518 |
| Vancomycin16 | 0.698 | -0.082 |
| Rv2680_day32 | 0.0 | 1.336 |
| H37Rv_KO_MarP | -0.145 | 0.23 |
| hypoxia_3wks | 0.459 | -0.068 |
| hypoxia_6wks | -1.625 | -0.035 |
| glycerol | 0.878 | -0.053 |
| cholesterol | 0.694 | 1.523 |
| AJ | 0.077 | -0.131 |
| Bibs02 | 1.025 | 0.567 |
| Bibs02c | -0.302 | -0.156 |
| BL6 | -1.479 | -0.906 |
| BL6a | -1.964 | -0.97 |
| BXD01 | -1.54 | -0.89 |
| BXD010 | -0.459 | -0.854 |
| BXD011 | -0.88 | -0.556 |
| BXD03 | -0.094 | -0.564 |
| BXD04 | -1.339 | -0.606 |
| BXD05 | -1.457 | -0.793 |
| BXD06 | -0.543 | -1.097 |
| BXD07 | -1.373 | -0.687 |
| BXD08 | -1.105 | -0.624 |
| BXD09 | -0.719 | -0.892 |
| CAST | -0.938 | 0.269 |
| CCcont | -1.481 | -1.095 |
| DS01 | 0.974 | 0.548 |
| DS02 | 0.635 | 0.421 |
| DS04 | 1.27 | 0.602 |
| DS0c | 0.943 | 0.404 |
| GP01 | -1.167 | 0.349 |
| GP02 | -0.984 | 0.307 |
| GP0c | -1.537 | -0.109 |
| NOD | -0.6 | 0.906 |
| NZO | 0.192 | -0.205 |
| PWK | -0.136 | -0.354 |
| H37Rv_KO_CtpC | -1.92 | -0.54 |
| H37Rv_KO_CtpD | -1.497 | 0.537 |
| H37Rv_KO_Rv1272 | -1.172 | -0.305 |
| H37Rv_KO_SugABC | -1.073 | -0.478 |
| H37Rv_KO_MbtN | -1.116 | -0.036 |
| Trans05 | -1.296 | 0.384 |
| macrophage_unactivated | -2.058 | -0.925 |
| IL1 | -1.361 | -0.97 |
| Rapamycin | 0.0 | -0.829 |
| Tcell | -1.906 | -0.671 |
| GMCSF | -2.308 | -0.57 |
| IFNab | -1.575 | -1.022 |
| IFNg | -0.497 | -0.123 |
| IFNg_GMCSF1 | -1.637 | 0.251 |
| Rv1432_day32 | 0.0 | 0.757 |
| Rv1565c_day32 | -0.305 | 0.763 |
| secA2_input | -0.258 | 0.261 |
| delta_Rv3594 | -2.385 | -0.223 |
| delta_Rv3717 | -2.796 | -0.227 |
| delta_Rv3811 | -0.947 | -0.235 |
| delta_Rv0954 | -1.828 | 0.088 |
| PonA1 | -0.931 | 0.323 |
| EccD1_KO | -0.898 | -0.033 |
| EspI_KO | 0.14 | -0.086 |
| PE35_KO | -0.796 | -0.146 |
| PPE68_KO | -1.491 | -0.16 |
| glycerol2 | -1.188 | 0.083 |
| lignocerate | -1.033 | -0.571 |
| oleate | -1.202 | -0.647 |
| phosphatidylcholine | -0.994 | -0.13 |
| acetate | -1.41 | -0.191 |
| glucAc | -0.877 | -0.389 |
| Rv0950ko | -1.631 | 0.093 |
| Rv1096ko | 0.133 | 0.184 |
| Rv3684ko | -0.982 | -0.105 |
| delta_otsA_trehalose | 0.564 | 0.465 |