Top 10 genes with highest correlation to Rv0674/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1453/- | (cc=0.5891) | info on Rv1453/- |
| Rv0901/- | (cc=0.5708) | info on Rv0901/- |
| Rv0218/- | (cc=0.5667) | info on Rv0218/- |
| Rv3637/- | (cc=0.5633) | info on Rv3637/- |
| Rv3401/- | (cc=0.563) | info on Rv3401/- |
| Rv1181/pks4 | (cc=0.5386) | info on Rv1181/pks4 |
| Rv0233/nrdB | (cc=0.5312) | info on Rv0233/nrdB |
| Rv2915c/- | (cc=0.5309) | info on Rv2915c/- |
| Rv2867c/- | (cc=0.5286) | info on Rv2867c/- |
| Rv2974c/- | (cc=0.5188) | info on Rv2974c/- |
Correlation of Rv0674/- with Rv0901/-
Normalized LFCs for Rv0674/-:
(description and provenance of datasets)
| Rv0674/- | Rv0901/- | |
| Fe_supp_jason_reseq | -0.863 | -0.317 |
| low_pH_jason_reseq | -0.915 | 0.049 |
| NO_jason_reseq | 0.194 | 0.273 |
| B6_jason_reseq | 1.023 | 0.797 |
| MHCII_jason_reseq | 1.392 | 0.649 |
| Isoniazid02 | -0.108 | 0.802 |
| Rifampicin4 | 0.712 | 1.335 |
| Ethambutol3 | 1.031 | 0.555 |
| Meropenem3 | 0.642 | 0.74 |
| Vancomycin16 | 0.698 | 0.801 |
| Rv2680_day32 | 0.0 | -1.236 |
| H37Rv_KO_MarP | -0.145 | -0.186 |
| hypoxia_3wks | 0.459 | 0.594 |
| hypoxia_6wks | -1.625 | -0.042 |
| glycerol | 0.878 | 2.393 |
| cholesterol | 0.694 | 1.1 |
| AJ | 0.077 | -0.277 |
| Bibs02 | 1.025 | 1.367 |
| Bibs02c | -0.302 | -0.064 |
| BL6 | -1.479 | -0.713 |
| BL6a | -1.964 | -0.224 |
| BXD01 | -1.54 | -0.024 |
| BXD010 | -0.459 | -0.757 |
| BXD011 | -0.88 | -0.953 |
| BXD03 | -0.094 | -2.13 |
| BXD04 | -1.339 | -1.138 |
| BXD05 | -1.457 | -1.109 |
| BXD06 | -0.543 | -0.391 |
| BXD07 | -1.373 | -0.102 |
| BXD08 | -1.105 | -0.015 |
| BXD09 | -0.719 | -0.773 |
| CAST | -0.938 | 0.414 |
| CCcont | -1.481 | -1.603 |
| DS01 | 0.974 | 1.341 |
| DS02 | 0.635 | 1.443 |
| DS04 | 1.27 | 1.275 |
| DS0c | 0.943 | 0.867 |
| GP01 | -1.167 | 0.04 |
| GP02 | -0.984 | 0.394 |
| GP0c | -1.537 | -0.754 |
| NOD | -0.6 | 0.737 |
| NZO | 0.192 | -0.405 |
| PWK | -0.136 | -0.621 |
| H37Rv_KO_CtpC | -1.92 | -0.665 |
| H37Rv_KO_CtpD | -1.497 | 0.08 |
| H37Rv_KO_Rv1272 | -1.172 | -0.602 |
| H37Rv_KO_SugABC | -1.073 | -0.042 |
| H37Rv_KO_MbtN | -1.116 | 0.504 |
| Trans05 | -1.296 | -0.468 |
| macrophage_unactivated | -2.058 | -1.449 |
| IL1 | -1.361 | -0.267 |
| Rapamycin | 0.0 | -0.184 |
| Tcell | -1.906 | -0.049 |
| GMCSF | -2.308 | -1.846 |
| IFNab | -1.575 | -0.928 |
| IFNg | -0.497 | -1.93 |
| IFNg_GMCSF1 | -1.637 | -0.484 |
| Rv1432_day32 | 0.0 | 1.592 |
| Rv1565c_day32 | -0.305 | 0.131 |
| secA2_input | -0.258 | -0.437 |
| delta_Rv3594 | -2.385 | 0.485 |
| delta_Rv3717 | -2.796 | -1.513 |
| delta_Rv3811 | -0.947 | -0.892 |
| delta_Rv0954 | -1.828 | -1.341 |
| PonA1 | -0.931 | -0.295 |
| EccD1_KO | -0.898 | 1.006 |
| EspI_KO | 0.14 | 0.984 |
| PE35_KO | -0.796 | -0.029 |
| PPE68_KO | -1.491 | 0.557 |
| glycerol2 | -1.188 | -0.303 |
| lignocerate | -1.033 | -0.525 |
| oleate | -1.202 | 0.502 |
| phosphatidylcholine | -0.994 | 0.104 |
| acetate | -1.41 | -0.165 |
| glucAc | -0.877 | -0.789 |
| Rv0950ko | -1.631 | 1.146 |
| Rv1096ko | 0.133 | 1.722 |
| Rv3684ko | -0.982 | 0.796 |
| delta_otsA_trehalose | 0.564 | 0.779 |