Top 10 genes with highest correlation to Rv0674/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1453/- | (cc=0.5891) | info on Rv1453/- |
| Rv0901/- | (cc=0.5708) | info on Rv0901/- |
| Rv0218/- | (cc=0.5667) | info on Rv0218/- |
| Rv3637/- | (cc=0.5633) | info on Rv3637/- |
| Rv3401/- | (cc=0.563) | info on Rv3401/- |
| Rv1181/pks4 | (cc=0.5386) | info on Rv1181/pks4 |
| Rv0233/nrdB | (cc=0.5312) | info on Rv0233/nrdB |
| Rv2915c/- | (cc=0.5309) | info on Rv2915c/- |
| Rv2867c/- | (cc=0.5286) | info on Rv2867c/- |
| Rv2974c/- | (cc=0.5188) | info on Rv2974c/- |
Correlation of Rv0674/- with Rv0233/nrdB
Normalized LFCs for Rv0674/-:
(description and provenance of datasets)
| Rv0674/- | Rv0233/nrdB | |
| Fe_supp_jason_reseq | -0.863 | 0.2 |
| low_pH_jason_reseq | -0.915 | -0.095 |
| NO_jason_reseq | 0.194 | -0.131 |
| B6_jason_reseq | 1.023 | 0.854 |
| MHCII_jason_reseq | 1.392 | 1.421 |
| Isoniazid02 | -0.108 | 0.322 |
| Rifampicin4 | 0.712 | -0.192 |
| Ethambutol3 | 1.031 | 0.154 |
| Meropenem3 | 0.642 | 0.291 |
| Vancomycin16 | 0.698 | -0.443 |
| Rv2680_day32 | 0.0 | 0.614 |
| H37Rv_KO_MarP | -0.145 | 0.167 |
| hypoxia_3wks | 0.459 | -0.159 |
| hypoxia_6wks | -1.625 | 0.192 |
| glycerol | 0.878 | -0.973 |
| cholesterol | 0.694 | -0.39 |
| AJ | 0.077 | 0.316 |
| Bibs02 | 1.025 | 0.891 |
| Bibs02c | -0.302 | 0.543 |
| BL6 | -1.479 | -1.416 |
| BL6a | -1.964 | -0.575 |
| BXD01 | -1.54 | -0.696 |
| BXD010 | -0.459 | -0.537 |
| BXD011 | -0.88 | -0.693 |
| BXD03 | -0.094 | -1.509 |
| BXD04 | -1.339 | -0.539 |
| BXD05 | -1.457 | -0.41 |
| BXD06 | -0.543 | -0.887 |
| BXD07 | -1.373 | -1.157 |
| BXD08 | -1.105 | -0.354 |
| BXD09 | -0.719 | -0.919 |
| CAST | -0.938 | -0.038 |
| CCcont | -1.481 | -1.564 |
| DS01 | 0.974 | 1.025 |
| DS02 | 0.635 | 0.748 |
| DS04 | 1.27 | 0.933 |
| DS0c | 0.943 | 0.548 |
| GP01 | -1.167 | -0.911 |
| GP02 | -0.984 | -0.359 |
| GP0c | -1.537 | -0.382 |
| NOD | -0.6 | 0.605 |
| NZO | 0.192 | 0.12 |
| PWK | -0.136 | -0.242 |
| H37Rv_KO_CtpC | -1.92 | -1.19 |
| H37Rv_KO_CtpD | -1.497 | -0.803 |
| H37Rv_KO_Rv1272 | -1.172 | -0.626 |
| H37Rv_KO_SugABC | -1.073 | -0.316 |
| H37Rv_KO_MbtN | -1.116 | -0.755 |
| Trans05 | -1.296 | -0.13 |
| macrophage_unactivated | -2.058 | -1.083 |
| IL1 | -1.361 | -0.193 |
| Rapamycin | 0.0 | -0.786 |
| Tcell | -1.906 | -0.046 |
| GMCSF | -2.308 | 0.459 |
| IFNab | -1.575 | -0.478 |
| IFNg | -0.497 | 0.38 |
| IFNg_GMCSF1 | -1.637 | -0.396 |
| Rv1432_day32 | 0.0 | 0.042 |
| Rv1565c_day32 | -0.305 | 0.963 |
| secA2_input | -0.258 | 0.106 |
| delta_Rv3594 | -2.385 | -0.399 |
| delta_Rv3717 | -2.796 | -0.766 |
| delta_Rv3811 | -0.947 | -0.589 |
| delta_Rv0954 | -1.828 | -0.252 |
| PonA1 | -0.931 | -0.066 |
| EccD1_KO | -0.898 | -0.286 |
| EspI_KO | 0.14 | -0.368 |
| PE35_KO | -0.796 | -1.041 |
| PPE68_KO | -1.491 | -0.483 |
| glycerol2 | -1.188 | -0.911 |
| lignocerate | -1.033 | -0.609 |
| oleate | -1.202 | -0.404 |
| phosphatidylcholine | -0.994 | -0.598 |
| acetate | -1.41 | -1.107 |
| glucAc | -0.877 | -1.029 |
| Rv0950ko | -1.631 | 0.308 |
| Rv1096ko | 0.133 | 0.805 |
| Rv3684ko | -0.982 | 0.259 |
| delta_otsA_trehalose | 0.564 | 0.437 |