Top 10 genes with highest correlation to Rv0629c/recD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1736c/narX | (cc=0.5616) | info on Rv1736c/narX |
| Rv2917/- | (cc=0.4732) | info on Rv2917/- |
| Rv2064/cobG | (cc=0.4694) | info on Rv2064/cobG |
| Rv0435c/- | (cc=0.4569) | info on Rv0435c/- |
| Rv3635/- | (cc=0.4549) | info on Rv3635/- |
| Rv3439c/- | (cc=0.4548) | info on Rv3439c/- |
| Rv0203/- | (cc=0.4543) | info on Rv0203/- |
| Rv0229c/- | (cc=0.4461) | info on Rv0229c/- |
| Rv1276c/- | (cc=0.4444) | info on Rv1276c/- |
| Rv1075c/- | (cc=0.4385) | info on Rv1075c/- |
Correlation of Rv0629c/recD with Rv3439c/-
Normalized LFCs for Rv0629c/recD:
(description and provenance of datasets)
| Rv0629c/recD | Rv3439c/- | |
| Fe_supp_jason_reseq | 0.535 | -0.661 |
| low_pH_jason_reseq | -2.044 | -1.138 |
| NO_jason_reseq | -0.323 | -0.41 |
| B6_jason_reseq | 1.265 | 0.863 |
| MHCII_jason_reseq | 1.048 | 0.712 |
| Isoniazid02 | -0.065 | 0.49 |
| Rifampicin4 | 0.401 | 0.501 |
| Ethambutol3 | 0.531 | 0.216 |
| Meropenem3 | 0.224 | 0.944 |
| Vancomycin16 | 0.058 | 0.329 |
| Rv2680_day32 | -0.07 | -0.131 |
| H37Rv_KO_MarP | 0.059 | 0.008 |
| hypoxia_3wks | 0.287 | 0.064 |
| hypoxia_6wks | 0.593 | 0.416 |
| glycerol | 0.753 | 0.831 |
| cholesterol | -0.031 | -0.004 |
| AJ | 0.0 | 0.35 |
| Bibs02 | 0.15 | -0.852 |
| Bibs02c | 0.023 | 0.596 |
| BL6 | -1.107 | -0.167 |
| BL6a | -0.756 | -0.258 |
| BXD01 | -1.06 | -0.84 |
| BXD010 | -0.469 | -0.482 |
| BXD011 | -1.16 | -0.788 |
| BXD03 | -1.1 | -0.476 |
| BXD04 | -0.346 | -1.466 |
| BXD05 | -0.058 | -0.633 |
| BXD06 | -0.708 | -0.519 |
| BXD07 | -0.863 | -0.991 |
| BXD08 | -0.936 | -0.382 |
| BXD09 | -0.473 | -0.506 |
| CAST | -0.232 | -0.22 |
| CCcont | -0.901 | -0.209 |
| DS01 | 0.601 | 0.573 |
| DS02 | -0.244 | 0.443 |
| DS04 | -0.361 | -0.131 |
| DS0c | -0.828 | 0.234 |
| GP01 | -0.803 | 0.022 |
| GP02 | 0.017 | -0.036 |
| GP0c | -0.131 | -0.339 |
| NOD | -0.692 | -0.739 |
| NZO | 0.929 | 0.533 |
| PWK | -0.108 | 0.507 |
| H37Rv_KO_CtpC | 0.301 | -1.21 |
| H37Rv_KO_CtpD | -2.039 | 0.156 |
| H37Rv_KO_Rv1272 | 0.171 | -0.388 |
| H37Rv_KO_SugABC | -1.457 | -1.238 |
| H37Rv_KO_MbtN | -1.275 | -1.602 |
| Trans05 | -0.329 | -0.711 |
| macrophage_unactivated | 0.919 | -0.366 |
| IL1 | -0.196 | -0.184 |
| Rapamycin | 0.258 | 0.301 |
| Tcell | 0.0 | -0.831 |
| GMCSF | -0.615 | 0.584 |
| IFNab | -0.133 | -0.284 |
| IFNg | -0.762 | 0.04 |
| IFNg_GMCSF1 | 0.39 | -0.452 |
| Rv1432_day32 | 0.0 | 0.057 |
| Rv1565c_day32 | 0.578 | 0.464 |
| secA2_input | -1.21 | 0.299 |
| delta_Rv3594 | 0.61 | 1.716 |
| delta_Rv3717 | -0.174 | 1.287 |
| delta_Rv3811 | 1.282 | 1.184 |
| delta_Rv0954 | 0.346 | 2.106 |
| PonA1 | -0.159 | 1.384 |
| EccD1_KO | 0.806 | -0.141 |
| EspI_KO | -1.035 | -0.106 |
| PE35_KO | -0.239 | -0.403 |
| PPE68_KO | -1.161 | -0.765 |
| glycerol2 | -0.769 | 0.394 |
| lignocerate | -1.161 | 0.43 |
| oleate | -0.499 | -0.37 |
| phosphatidylcholine | -0.536 | 0.09 |
| acetate | -1.096 | -1.037 |
| glucAc | -0.364 | -0.233 |
| Rv0950ko | 0.106 | -0.112 |
| Rv1096ko | 0.501 | 0.365 |
| Rv3684ko | -0.236 | 0.039 |
| delta_otsA_trehalose | -1.204 | 0.507 |