Top 10 genes with highest correlation to Rv0629c/recD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1736c/narX | (cc=0.5616) | info on Rv1736c/narX |
| Rv2917/- | (cc=0.4732) | info on Rv2917/- |
| Rv2064/cobG | (cc=0.4694) | info on Rv2064/cobG |
| Rv0435c/- | (cc=0.4569) | info on Rv0435c/- |
| Rv3635/- | (cc=0.4549) | info on Rv3635/- |
| Rv3439c/- | (cc=0.4548) | info on Rv3439c/- |
| Rv0203/- | (cc=0.4543) | info on Rv0203/- |
| Rv0229c/- | (cc=0.4461) | info on Rv0229c/- |
| Rv1276c/- | (cc=0.4444) | info on Rv1276c/- |
| Rv1075c/- | (cc=0.4385) | info on Rv1075c/- |
Correlation of Rv0629c/recD with Rv0435c/-
Normalized LFCs for Rv0629c/recD:
(description and provenance of datasets)
| Rv0629c/recD | Rv0435c/- | |
| Fe_supp_jason_reseq | 0.535 | -0.83 |
| low_pH_jason_reseq | -2.044 | -0.957 |
| NO_jason_reseq | -0.323 | 0.21 |
| B6_jason_reseq | 1.265 | 0.495 |
| MHCII_jason_reseq | 1.048 | 0.761 |
| Isoniazid02 | -0.065 | 0.403 |
| Rifampicin4 | 0.401 | 0.0 |
| Ethambutol3 | 0.531 | -0.202 |
| Meropenem3 | 0.224 | 1.136 |
| Vancomycin16 | 0.058 | 0.462 |
| Rv2680_day32 | -0.07 | -0.621 |
| H37Rv_KO_MarP | 0.059 | 0.83 |
| hypoxia_3wks | 0.287 | -0.271 |
| hypoxia_6wks | 0.593 | 0.441 |
| glycerol | 0.753 | 0.487 |
| cholesterol | -0.031 | 0.019 |
| AJ | 0.0 | 0.455 |
| Bibs02 | 0.15 | 0.262 |
| Bibs02c | 0.023 | 0.061 |
| BL6 | -1.107 | -0.85 |
| BL6a | -0.756 | -0.766 |
| BXD01 | -1.06 | -0.902 |
| BXD010 | -0.469 | -0.442 |
| BXD011 | -1.16 | -0.499 |
| BXD03 | -1.1 | -1.209 |
| BXD04 | -0.346 | -0.34 |
| BXD05 | -0.058 | -0.689 |
| BXD06 | -0.708 | -0.677 |
| BXD07 | -0.863 | -0.785 |
| BXD08 | -0.936 | -0.937 |
| BXD09 | -0.473 | -0.766 |
| CAST | -0.232 | -0.195 |
| CCcont | -0.901 | -1.324 |
| DS01 | 0.601 | 0.305 |
| DS02 | -0.244 | 0.014 |
| DS04 | -0.361 | 0.129 |
| DS0c | -0.828 | 0.171 |
| GP01 | -0.803 | -0.875 |
| GP02 | 0.017 | -0.472 |
| GP0c | -0.131 | -0.782 |
| NOD | -0.692 | -0.264 |
| NZO | 0.929 | -0.013 |
| PWK | -0.108 | -0.058 |
| H37Rv_KO_CtpC | 0.301 | -1.134 |
| H37Rv_KO_CtpD | -2.039 | -0.139 |
| H37Rv_KO_Rv1272 | 0.171 | -1.317 |
| H37Rv_KO_SugABC | -1.457 | -0.203 |
| H37Rv_KO_MbtN | -1.275 | -1.563 |
| Trans05 | -0.329 | -1.139 |
| macrophage_unactivated | 0.919 | -0.461 |
| IL1 | -0.196 | 0.086 |
| Rapamycin | 0.258 | -0.424 |
| Tcell | 0.0 | -0.244 |
| GMCSF | -0.615 | 0.224 |
| IFNab | -0.133 | -0.877 |
| IFNg | -0.762 | -0.118 |
| IFNg_GMCSF1 | 0.39 | 0.374 |
| Rv1432_day32 | 0.0 | -0.086 |
| Rv1565c_day32 | 0.578 | 0.78 |
| secA2_input | -1.21 | 0.016 |
| delta_Rv3594 | 0.61 | -1.08 |
| delta_Rv3717 | -0.174 | -0.56 |
| delta_Rv3811 | 1.282 | -0.739 |
| delta_Rv0954 | 0.346 | -0.386 |
| PonA1 | -0.159 | -0.159 |
| EccD1_KO | 0.806 | 0.178 |
| EspI_KO | -1.035 | -0.328 |
| PE35_KO | -0.239 | -0.648 |
| PPE68_KO | -1.161 | -0.509 |
| glycerol2 | -0.769 | -0.967 |
| lignocerate | -1.161 | -0.647 |
| oleate | -0.499 | -1.133 |
| phosphatidylcholine | -0.536 | -0.73 |
| acetate | -1.096 | -1.237 |
| glucAc | -0.364 | -0.567 |
| Rv0950ko | 0.106 | 0.199 |
| Rv1096ko | 0.501 | 0.89 |
| Rv3684ko | -0.236 | 0.478 |
| delta_otsA_trehalose | -1.204 | -2.069 |